Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf38Q8BI21 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf38Q8BI21 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf38Q8BI21 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf38Q8BI21 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf38Q8BI21 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rnf38Q8BI21 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf38Q8BI21 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf38Q8BI21 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.51■□□□□ 0.87
Rnf38Q8BI21 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf38Q8BI21 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf38Q8BI21 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf38Q8BI21 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf38Q8BI21 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Rnf38Q8BI21 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Rnf38Q8BI21 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Rnf38Q8BI21 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf38Q8BI21 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf38Q8BI21 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf38Q8BI21 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf38Q8BI21 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf38Q8BI21 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf38Q8BI21 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf38Q8BI21 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf38Q8BI21 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf38Q8BI21 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf38Q8BI21 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.47■□□□□ 0.87
Rnf38Q8BI21 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Rnf38Q8BI21 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf38Q8BI21 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Rnf38Q8BI21 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf38Q8BI21 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
Rnf38Q8BI21 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf38Q8BI21 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Rnf38Q8BI21 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Rnf38Q8BI21 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Rnf38Q8BI21 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.46■□□□□ 0.87
Rnf38Q8BI21 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf38Q8BI21 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf38Q8BI21 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf38Q8BI21 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf38Q8BI21 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf38Q8BI21 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf38Q8BI21 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf38Q8BI21 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf38Q8BI21 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Rnf38Q8BI21 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf38Q8BI21 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf38Q8BI21 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf38Q8BI21 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf38Q8BI21 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf38Q8BI21 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf38Q8BI21 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf38Q8BI21 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.44■□□□□ 0.86
Rnf38Q8BI21 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf38Q8BI21 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.44■□□□□ 0.86
Rnf38Q8BI21 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf38Q8BI21 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf38Q8BI21 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf38Q8BI21 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.43■□□□□ 0.86
Rnf38Q8BI21 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Rnf38Q8BI21 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf38Q8BI21 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
Rnf38Q8BI21 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf38Q8BI21 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf38Q8BI21 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf38Q8BI21 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf38Q8BI21 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf38Q8BI21 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf38Q8BI21 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Rnf38Q8BI21 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.42■□□□□ 0.86
Rnf38Q8BI21 Mir6538-201ENSMUST00000183713 110 ntBASIC20.42■□□□□ 0.86
Rnf38Q8BI21 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.42■□□□□ 0.86
Rnf38Q8BI21 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf38Q8BI21 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf38Q8BI21 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf38Q8BI21 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf38Q8BI21 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf38Q8BI21 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf38Q8BI21 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf38Q8BI21 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf38Q8BI21 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Rnf38Q8BI21 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf38Q8BI21 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf38Q8BI21 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf38Q8BI21 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf38Q8BI21 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf38Q8BI21 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rnf38Q8BI21 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rnf38Q8BI21 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.39■□□□□ 0.86
Rnf38Q8BI21 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf38Q8BI21 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf38Q8BI21 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf38Q8BI21 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.39■□□□□ 0.85
Rnf38Q8BI21 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf38Q8BI21 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.38■□□□□ 0.85
Rnf38Q8BI21 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf38Q8BI21 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf38Q8BI21 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf38Q8BI21 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms