Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn3bQ8BHK2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Scn3bQ8BHK2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn3bQ8BHK2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Scn3bQ8BHK2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Scn3bQ8BHK2 Gm9812-201ENSMUST00000061934 968 ntBASIC19.77■□□□□ 0.76
Scn3bQ8BHK2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Scn3bQ8BHK2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn3bQ8BHK2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.76■□□□□ 0.75
Scn3bQ8BHK2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn3bQ8BHK2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.76■□□□□ 0.75
Scn3bQ8BHK2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn3bQ8BHK2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.76■□□□□ 0.75
Scn3bQ8BHK2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Scn3bQ8BHK2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scn3bQ8BHK2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn3bQ8BHK2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.75■□□□□ 0.75
Scn3bQ8BHK2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.75■□□□□ 0.75
Scn3bQ8BHK2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scn3bQ8BHK2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn3bQ8BHK2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn3bQ8BHK2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn3bQ8BHK2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn3bQ8BHK2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Scn3bQ8BHK2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.74■□□□□ 0.75
Scn3bQ8BHK2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn3bQ8BHK2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scn3bQ8BHK2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Scn3bQ8BHK2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn3bQ8BHK2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
Scn3bQ8BHK2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn3bQ8BHK2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn3bQ8BHK2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Scn3bQ8BHK2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Scn3bQ8BHK2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn3bQ8BHK2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Scn3bQ8BHK2 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.72■□□□□ 0.75
Scn3bQ8BHK2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scn3bQ8BHK2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Scn3bQ8BHK2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scn3bQ8BHK2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Scn3bQ8BHK2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn3bQ8BHK2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn3bQ8BHK2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Scn3bQ8BHK2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn3bQ8BHK2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Scn3bQ8BHK2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn3bQ8BHK2 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.71■□□□□ 0.75
Scn3bQ8BHK2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn3bQ8BHK2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.7■□□□□ 0.74
Scn3bQ8BHK2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scn3bQ8BHK2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn3bQ8BHK2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scn3bQ8BHK2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn3bQ8BHK2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn3bQ8BHK2 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.69■□□□□ 0.74
Scn3bQ8BHK2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn3bQ8BHK2 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Scn3bQ8BHK2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn3bQ8BHK2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn3bQ8BHK2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn3bQ8BHK2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scn3bQ8BHK2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn3bQ8BHK2 Terc-201ENSMUST00000082862 423 ntBASIC19.69■□□□□ 0.74
Scn3bQ8BHK2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
Scn3bQ8BHK2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.69■□□□□ 0.74
Scn3bQ8BHK2 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.69■□□□□ 0.74
Scn3bQ8BHK2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn3bQ8BHK2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn3bQ8BHK2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Scn3bQ8BHK2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn3bQ8BHK2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn3bQ8BHK2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.67■□□□□ 0.74
Scn3bQ8BHK2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Scn3bQ8BHK2 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn3bQ8BHK2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn3bQ8BHK2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn3bQ8BHK2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn3bQ8BHK2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.66■□□□□ 0.74
Scn3bQ8BHK2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn3bQ8BHK2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn3bQ8BHK2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.66■□□□□ 0.74
Scn3bQ8BHK2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn3bQ8BHK2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.66■□□□□ 0.74
Scn3bQ8BHK2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn3bQ8BHK2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn3bQ8BHK2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Scn3bQ8BHK2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn3bQ8BHK2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn3bQ8BHK2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn3bQ8BHK2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.65■□□□□ 0.74
Scn3bQ8BHK2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.65■□□□□ 0.74
Scn3bQ8BHK2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn3bQ8BHK2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn3bQ8BHK2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.65■□□□□ 0.74
Scn3bQ8BHK2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn3bQ8BHK2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn3bQ8BHK2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Scn3bQ8BHK2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Scn3bQ8BHK2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms