Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc5a7Q8BGY9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc5a7Q8BGY9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc5a7Q8BGY9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.66■□□□□ 0.58
Slc5a7Q8BGY9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc5a7Q8BGY9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Slc5a7Q8BGY9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc5a7Q8BGY9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc5a7Q8BGY9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Slc5a7Q8BGY9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc5a7Q8BGY9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc5a7Q8BGY9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Slc5a7Q8BGY9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Slc5a7Q8BGY9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc5a7Q8BGY9 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.65■□□□□ 0.58
Slc5a7Q8BGY9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc5a7Q8BGY9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Slc5a7Q8BGY9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.64■□□□□ 0.57
Slc5a7Q8BGY9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.64■□□□□ 0.57
Slc5a7Q8BGY9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Slc5a7Q8BGY9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.64■□□□□ 0.57
Slc5a7Q8BGY9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc5a7Q8BGY9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc5a7Q8BGY9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc5a7Q8BGY9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.63■□□□□ 0.57
Slc5a7Q8BGY9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc5a7Q8BGY9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc5a7Q8BGY9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc5a7Q8BGY9 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.62■□□□□ 0.57
Slc5a7Q8BGY9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc5a7Q8BGY9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Slc5a7Q8BGY9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc5a7Q8BGY9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc5a7Q8BGY9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc5a7Q8BGY9 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.61■□□□□ 0.57
Slc5a7Q8BGY9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc5a7Q8BGY9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Slc5a7Q8BGY9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc5a7Q8BGY9 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc5a7Q8BGY9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc5a7Q8BGY9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Slc5a7Q8BGY9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc5a7Q8BGY9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc5a7Q8BGY9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Slc5a7Q8BGY9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc5a7Q8BGY9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Slc5a7Q8BGY9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Slc5a7Q8BGY9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Slc5a7Q8BGY9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.59■□□□□ 0.57
Slc5a7Q8BGY9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Slc5a7Q8BGY9 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.59■□□□□ 0.57
Slc5a7Q8BGY9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc5a7Q8BGY9 Gm9812-201ENSMUST00000061934 968 ntBASIC18.59■□□□□ 0.57
Slc5a7Q8BGY9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc5a7Q8BGY9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Slc5a7Q8BGY9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Slc5a7Q8BGY9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc5a7Q8BGY9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Slc5a7Q8BGY9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Slc5a7Q8BGY9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Slc5a7Q8BGY9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Slc5a7Q8BGY9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Slc5a7Q8BGY9 Iqck-206ENSMUST00000208658 2891 ntBASIC18.58■□□□□ 0.57
Slc5a7Q8BGY9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.58■□□□□ 0.56
Slc5a7Q8BGY9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Slc5a7Q8BGY9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slc5a7Q8BGY9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Slc5a7Q8BGY9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slc5a7Q8BGY9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Slc5a7Q8BGY9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc5a7Q8BGY9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc5a7Q8BGY9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc5a7Q8BGY9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc5a7Q8BGY9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc5a7Q8BGY9 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.57■□□□□ 0.56
Slc5a7Q8BGY9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc5a7Q8BGY9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc5a7Q8BGY9 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.57■□□□□ 0.56
Slc5a7Q8BGY9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Slc5a7Q8BGY9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc5a7Q8BGY9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc5a7Q8BGY9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc5a7Q8BGY9 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.56■□□□□ 0.56
Slc5a7Q8BGY9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Slc5a7Q8BGY9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.56■□□□□ 0.56
Slc5a7Q8BGY9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.55■□□□□ 0.56
Slc5a7Q8BGY9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Slc5a7Q8BGY9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.55■□□□□ 0.56
Slc5a7Q8BGY9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.55■□□□□ 0.56
Slc5a7Q8BGY9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc5a7Q8BGY9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc5a7Q8BGY9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Slc5a7Q8BGY9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.54■□□□□ 0.56
Slc5a7Q8BGY9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc5a7Q8BGY9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc5a7Q8BGY9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc5a7Q8BGY9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc5a7Q8BGY9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Slc5a7Q8BGY9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Slc5a7Q8BGY9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms