Protein–RNA interactions for Protein: Q8BG54

Sptlc3, Serine palmitoyltransferase 3, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc3Q8BG54 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Sptlc3Q8BG54 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Sptlc3Q8BG54 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Sptlc3Q8BG54 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC25.78■■□□□ 1.72
Sptlc3Q8BG54 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC25.78■■□□□ 1.72
Sptlc3Q8BG54 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Sptlc3Q8BG54 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Sptlc3Q8BG54 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Sptlc3Q8BG54 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC25.77■■□□□ 1.72
Sptlc3Q8BG54 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Sptlc3Q8BG54 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC25.77■■□□□ 1.72
Sptlc3Q8BG54 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Sptlc3Q8BG54 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
Sptlc3Q8BG54 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Sptlc3Q8BG54 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC25.76■■□□□ 1.71
Sptlc3Q8BG54 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Sptlc3Q8BG54 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Sptlc3Q8BG54 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC25.75■■□□□ 1.71
Sptlc3Q8BG54 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Sptlc3Q8BG54 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Sptlc3Q8BG54 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Sptlc3Q8BG54 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
Sptlc3Q8BG54 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Sptlc3Q8BG54 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC25.74■■□□□ 1.71
Sptlc3Q8BG54 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Sptlc3Q8BG54 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Sptlc3Q8BG54 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
Sptlc3Q8BG54 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
Sptlc3Q8BG54 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC25.73■■□□□ 1.71
Sptlc3Q8BG54 Gm10399-202ENSMUST00000202768 748 ntBASIC25.73■■□□□ 1.71
Sptlc3Q8BG54 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC25.73■■□□□ 1.71
Sptlc3Q8BG54 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
Sptlc3Q8BG54 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Sptlc3Q8BG54 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Sptlc3Q8BG54 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Sptlc3Q8BG54 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
Sptlc3Q8BG54 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Sptlc3Q8BG54 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC25.71■■□□□ 1.71
Sptlc3Q8BG54 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Sptlc3Q8BG54 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Sptlc3Q8BG54 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC25.7■■□□□ 1.71
Sptlc3Q8BG54 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Sptlc3Q8BG54 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC25.7■■□□□ 1.7
Sptlc3Q8BG54 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Sptlc3Q8BG54 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
Sptlc3Q8BG54 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
Sptlc3Q8BG54 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Sptlc3Q8BG54 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Sptlc3Q8BG54 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Sptlc3Q8BG54 AC158990.1-201ENSMUST00000221450 2016 ntBASIC25.69■■□□□ 1.7
Sptlc3Q8BG54 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Sptlc3Q8BG54 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC25.69■■□□□ 1.7
Sptlc3Q8BG54 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Sptlc3Q8BG54 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Sptlc3Q8BG54 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Sptlc3Q8BG54 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Sptlc3Q8BG54 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC25.68■■□□□ 1.7
Sptlc3Q8BG54 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC25.68■■□□□ 1.7
Sptlc3Q8BG54 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC25.68■■□□□ 1.7
Sptlc3Q8BG54 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Sptlc3Q8BG54 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Sptlc3Q8BG54 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Sptlc3Q8BG54 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
Sptlc3Q8BG54 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Sptlc3Q8BG54 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Sptlc3Q8BG54 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC25.67■■□□□ 1.7
Sptlc3Q8BG54 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC25.66■■□□□ 1.7
Sptlc3Q8BG54 Gm10620-201ENSMUST00000098379 1332 ntBASIC25.66■■□□□ 1.7
Sptlc3Q8BG54 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Sptlc3Q8BG54 Gm22238-201ENSMUST00000175222 88 ntBASIC25.65■■□□□ 1.7
Sptlc3Q8BG54 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Sptlc3Q8BG54 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC25.65■■□□□ 1.7
Sptlc3Q8BG54 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC25.65■■□□□ 1.7
Sptlc3Q8BG54 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Sptlc3Q8BG54 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Sptlc3Q8BG54 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC25.64■■□□□ 1.7
Sptlc3Q8BG54 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Sptlc3Q8BG54 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Sptlc3Q8BG54 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
Sptlc3Q8BG54 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Sptlc3Q8BG54 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Sptlc3Q8BG54 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC25.62■■□□□ 1.69
Sptlc3Q8BG54 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Sptlc3Q8BG54 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Sptlc3Q8BG54 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Sptlc3Q8BG54 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
Sptlc3Q8BG54 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Sptlc3Q8BG54 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
Sptlc3Q8BG54 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Sptlc3Q8BG54 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
Sptlc3Q8BG54 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Sptlc3Q8BG54 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
Sptlc3Q8BG54 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC25.59■■□□□ 1.69
Sptlc3Q8BG54 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
Sptlc3Q8BG54 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Sptlc3Q8BG54 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
Sptlc3Q8BG54 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Sptlc3Q8BG54 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Sptlc3Q8BG54 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Sptlc3Q8BG54 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms