Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ubp1Q811S7 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ubp1Q811S7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Ubp1Q811S7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.97■□□□□ 0.95
Ubp1Q811S7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Ubp1Q811S7 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ubp1Q811S7 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.96■□□□□ 0.95
Ubp1Q811S7 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ubp1Q811S7 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ubp1Q811S7 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ubp1Q811S7 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Ubp1Q811S7 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ubp1Q811S7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Ubp1Q811S7 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ubp1Q811S7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.96■□□□□ 0.95
Ubp1Q811S7 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ubp1Q811S7 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ubp1Q811S7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Ubp1Q811S7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.95■□□□□ 0.94
Ubp1Q811S7 Gm43566-201ENSMUST00000196851 808 ntBASIC20.95■□□□□ 0.94
Ubp1Q811S7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.95■□□□□ 0.94
Ubp1Q811S7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Ubp1Q811S7 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ubp1Q811S7 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Ubp1Q811S7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ubp1Q811S7 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ubp1Q811S7 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ubp1Q811S7 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ubp1Q811S7 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ubp1Q811S7 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ubp1Q811S7 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Ubp1Q811S7 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ubp1Q811S7 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ubp1Q811S7 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ubp1Q811S7 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Ubp1Q811S7 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Ubp1Q811S7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.93■□□□□ 0.94
Ubp1Q811S7 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ubp1Q811S7 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ubp1Q811S7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ubp1Q811S7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ubp1Q811S7 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ubp1Q811S7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ubp1Q811S7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ubp1Q811S7 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ubp1Q811S7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Ubp1Q811S7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ubp1Q811S7 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ubp1Q811S7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.91■□□□□ 0.94
Ubp1Q811S7 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.91■□□□□ 0.94
Ubp1Q811S7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.91■□□□□ 0.94
Ubp1Q811S7 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.91■□□□□ 0.94
Ubp1Q811S7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ubp1Q811S7 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ubp1Q811S7 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ubp1Q811S7 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.9■□□□□ 0.94
Ubp1Q811S7 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.9■□□□□ 0.94
Ubp1Q811S7 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ubp1Q811S7 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ubp1Q811S7 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.89■□□□□ 0.93
Ubp1Q811S7 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Ubp1Q811S7 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ubp1Q811S7 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ubp1Q811S7 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ubp1Q811S7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Ubp1Q811S7 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.88■□□□□ 0.93
Ubp1Q811S7 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ubp1Q811S7 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ubp1Q811S7 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.88■□□□□ 0.93
Ubp1Q811S7 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Ubp1Q811S7 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ubp1Q811S7 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Ubp1Q811S7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Ubp1Q811S7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ubp1Q811S7 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ubp1Q811S7 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ubp1Q811S7 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ubp1Q811S7 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.86■□□□□ 0.93
Ubp1Q811S7 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ubp1Q811S7 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ubp1Q811S7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ubp1Q811S7 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.86■□□□□ 0.93
Ubp1Q811S7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.86■□□□□ 0.93
Ubp1Q811S7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ubp1Q811S7 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ubp1Q811S7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ubp1Q811S7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ubp1Q811S7 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.85■□□□□ 0.93
Ubp1Q811S7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ubp1Q811S7 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ubp1Q811S7 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ubp1Q811S7 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ubp1Q811S7 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ubp1Q811S7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ubp1Q811S7 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ubp1Q811S7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ubp1Q811S7 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ubp1Q811S7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ubp1Q811S7 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.84■□□□□ 0.93
Ubp1Q811S7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms