Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim36Q80WG7 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.46■□□□□ 0.87
Trim36Q80WG7 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.45■□□□□ 0.87
Trim36Q80WG7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.45■□□□□ 0.86
Trim36Q80WG7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Trim36Q80WG7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trim36Q80WG7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim36Q80WG7 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim36Q80WG7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim36Q80WG7 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Trim36Q80WG7 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim36Q80WG7 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Trim36Q80WG7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim36Q80WG7 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim36Q80WG7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim36Q80WG7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim36Q80WG7 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim36Q80WG7 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim36Q80WG7 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.43■□□□□ 0.86
Trim36Q80WG7 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim36Q80WG7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trim36Q80WG7 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim36Q80WG7 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Trim36Q80WG7 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim36Q80WG7 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim36Q80WG7 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim36Q80WG7 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Trim36Q80WG7 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim36Q80WG7 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.42■□□□□ 0.86
Trim36Q80WG7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim36Q80WG7 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.42■□□□□ 0.86
Trim36Q80WG7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim36Q80WG7 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim36Q80WG7 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim36Q80WG7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trim36Q80WG7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Trim36Q80WG7 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trim36Q80WG7 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim36Q80WG7 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim36Q80WG7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trim36Q80WG7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim36Q80WG7 Gm10420-201ENSMUST00000121713 882 ntBASIC20.39■□□□□ 0.85
Trim36Q80WG7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.39■□□□□ 0.85
Trim36Q80WG7 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Trim36Q80WG7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim36Q80WG7 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.39■□□□□ 0.85
Trim36Q80WG7 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim36Q80WG7 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim36Q80WG7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim36Q80WG7 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim36Q80WG7 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.38■□□□□ 0.85
Trim36Q80WG7 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Trim36Q80WG7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trim36Q80WG7 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Trim36Q80WG7 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trim36Q80WG7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Trim36Q80WG7 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim36Q80WG7 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.37■□□□□ 0.85
Trim36Q80WG7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim36Q80WG7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim36Q80WG7 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim36Q80WG7 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Trim36Q80WG7 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim36Q80WG7 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim36Q80WG7 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.36■□□□□ 0.85
Trim36Q80WG7 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.36■□□□□ 0.85
Trim36Q80WG7 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim36Q80WG7 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim36Q80WG7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim36Q80WG7 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Trim36Q80WG7 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim36Q80WG7 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.35■□□□□ 0.85
Trim36Q80WG7 Gm44428-201ENSMUST00000204474 874 ntBASIC20.35■□□□□ 0.85
Trim36Q80WG7 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.35■□□□□ 0.85
Trim36Q80WG7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim36Q80WG7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim36Q80WG7 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim36Q80WG7 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.34■□□□□ 0.85
Trim36Q80WG7 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim36Q80WG7 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim36Q80WG7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim36Q80WG7 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Trim36Q80WG7 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trim36Q80WG7 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.33■□□□□ 0.84
Trim36Q80WG7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim36Q80WG7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim36Q80WG7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim36Q80WG7 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim36Q80WG7 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim36Q80WG7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim36Q80WG7 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Trim36Q80WG7 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.32■□□□□ 0.84
Trim36Q80WG7 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim36Q80WG7 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim36Q80WG7 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trim36Q80WG7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Trim36Q80WG7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.31■□□□□ 0.84
Trim36Q80WG7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trim36Q80WG7 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim36Q80WG7 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms