Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Sdc3Q64519 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sdc3Q64519 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.4■□□□□ 0.86
Sdc3Q64519 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Sdc3Q64519 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sdc3Q64519 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sdc3Q64519 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sdc3Q64519 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sdc3Q64519 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sdc3Q64519 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sdc3Q64519 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Sdc3Q64519 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.39■□□□□ 0.85
Sdc3Q64519 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sdc3Q64519 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sdc3Q64519 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdc3Q64519 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdc3Q64519 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdc3Q64519 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdc3Q64519 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdc3Q64519 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Sdc3Q64519 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdc3Q64519 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdc3Q64519 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sdc3Q64519 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sdc3Q64519 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Sdc3Q64519 Gm10232-201ENSMUST00000089221 720 ntBASIC20.37■□□□□ 0.85
Sdc3Q64519 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sdc3Q64519 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sdc3Q64519 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sdc3Q64519 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sdc3Q64519 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Sdc3Q64519 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sdc3Q64519 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sdc3Q64519 Gm22567-201ENSMUST00000175542 342 ntBASIC20.36■□□□□ 0.85
Sdc3Q64519 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.36■□□□□ 0.85
Sdc3Q64519 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sdc3Q64519 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sdc3Q64519 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.35■□□□□ 0.85
Sdc3Q64519 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sdc3Q64519 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Sdc3Q64519 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sdc3Q64519 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.35■□□□□ 0.85
Sdc3Q64519 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.35■□□□□ 0.85
Sdc3Q64519 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sdc3Q64519 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sdc3Q64519 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.35■□□□□ 0.85
Sdc3Q64519 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sdc3Q64519 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Sdc3Q64519 Rps24-207ENSMUST00000224568 714 ntBASIC20.34■□□□□ 0.85
Sdc3Q64519 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sdc3Q64519 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sdc3Q64519 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Sdc3Q64519 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sdc3Q64519 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sdc3Q64519 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Sdc3Q64519 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.33■□□□□ 0.85
Sdc3Q64519 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sdc3Q64519 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Sdc3Q64519 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Sdc3Q64519 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Sdc3Q64519 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.32■□□□□ 0.84
Sdc3Q64519 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sdc3Q64519 Gm14117-201ENSMUST00000122417 843 ntBASIC20.32■□□□□ 0.84
Sdc3Q64519 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.32■□□□□ 0.84
Sdc3Q64519 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sdc3Q64519 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sdc3Q64519 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sdc3Q64519 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sdc3Q64519 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sdc3Q64519 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sdc3Q64519 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sdc3Q64519 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sdc3Q64519 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sdc3Q64519 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.31■□□□□ 0.84
Sdc3Q64519 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.31■□□□□ 0.84
Sdc3Q64519 Gm9959-201ENSMUST00000068277 390 ntBASIC20.31■□□□□ 0.84
Sdc3Q64519 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Sdc3Q64519 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sdc3Q64519 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sdc3Q64519 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sdc3Q64519 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Sdc3Q64519 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sdc3Q64519 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sdc3Q64519 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.3■□□□□ 0.84
Sdc3Q64519 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sdc3Q64519 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sdc3Q64519 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sdc3Q64519 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Sdc3Q64519 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sdc3Q64519 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sdc3Q64519 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.29■□□□□ 0.84
Sdc3Q64519 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sdc3Q64519 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.29■□□□□ 0.84
Sdc3Q64519 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sdc3Q64519 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sdc3Q64519 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.28■□□□□ 0.84
Sdc3Q64519 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.28■□□□□ 0.84
Sdc3Q64519 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sdc3Q64519 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sdc3Q64519 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms