Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cd47Q61735 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cd47Q61735 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cd47Q61735 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cd47Q61735 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Cd47Q61735 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cd47Q61735 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cd47Q61735 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cd47Q61735 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cd47Q61735 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cd47Q61735 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cd47Q61735 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cd47Q61735 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cd47Q61735 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.28■□□□□ 0.68
Cd47Q61735 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cd47Q61735 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Cd47Q61735 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cd47Q61735 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cd47Q61735 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cd47Q61735 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cd47Q61735 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cd47Q61735 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.27■□□□□ 0.68
Cd47Q61735 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cd47Q61735 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
Cd47Q61735 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cd47Q61735 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.27■□□□□ 0.68
Cd47Q61735 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cd47Q61735 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.26■□□□□ 0.67
Cd47Q61735 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.26■□□□□ 0.67
Cd47Q61735 Gm27502-201ENSMUST00000183495 199 ntBASIC19.26■□□□□ 0.67
Cd47Q61735 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cd47Q61735 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd47Q61735 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cd47Q61735 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd47Q61735 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.26■□□□□ 0.67
Cd47Q61735 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Cd47Q61735 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd47Q61735 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd47Q61735 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd47Q61735 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd47Q61735 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.25■□□□□ 0.67
Cd47Q61735 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cd47Q61735 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd47Q61735 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd47Q61735 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cd47Q61735 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cd47Q61735 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd47Q61735 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cd47Q61735 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cd47Q61735 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cd47Q61735 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cd47Q61735 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cd47Q61735 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.24■□□□□ 0.67
Cd47Q61735 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd47Q61735 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd47Q61735 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cd47Q61735 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.24■□□□□ 0.67
Cd47Q61735 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd47Q61735 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd47Q61735 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd47Q61735 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd47Q61735 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
Cd47Q61735 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cd47Q61735 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Cd47Q61735 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Cd47Q61735 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd47Q61735 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.23■□□□□ 0.67
Cd47Q61735 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd47Q61735 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cd47Q61735 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd47Q61735 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd47Q61735 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd47Q61735 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd47Q61735 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cd47Q61735 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cd47Q61735 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd47Q61735 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.21■□□□□ 0.67
Cd47Q61735 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cd47Q61735 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cd47Q61735 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd47Q61735 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cd47Q61735 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cd47Q61735 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd47Q61735 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cd47Q61735 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd47Q61735 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd47Q61735 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd47Q61735 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd47Q61735 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cd47Q61735 Gm14523-201ENSMUST00000117260 558 ntBASIC19.19■□□□□ 0.66
Cd47Q61735 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.19■□□□□ 0.66
Cd47Q61735 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cd47Q61735 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd47Q61735 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd47Q61735 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd47Q61735 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd47Q61735 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cd47Q61735 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd47Q61735 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd47Q61735 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms