Protein–RNA interactions for Protein: Q61657

Hes3, Transcription factor HES-3, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes3Q61657 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hes3Q61657 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Hes3Q61657 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hes3Q61657 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hes3Q61657 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hes3Q61657 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Hes3Q61657 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hes3Q61657 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hes3Q61657 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hes3Q61657 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hes3Q61657 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hes3Q61657 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hes3Q61657 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hes3Q61657 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hes3Q61657 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hes3Q61657 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
Hes3Q61657 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hes3Q61657 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Hes3Q61657 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hes3Q61657 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hes3Q61657 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.29■□□□□ 0.52
Hes3Q61657 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hes3Q61657 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hes3Q61657 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.29■□□□□ 0.52
Hes3Q61657 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.29■□□□□ 0.52
Hes3Q61657 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hes3Q61657 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Hes3Q61657 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hes3Q61657 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hes3Q61657 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hes3Q61657 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hes3Q61657 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hes3Q61657 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hes3Q61657 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hes3Q61657 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hes3Q61657 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Hes3Q61657 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hes3Q61657 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hes3Q61657 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Hes3Q61657 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.27■□□□□ 0.52
Hes3Q61657 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.27■□□□□ 0.52
Hes3Q61657 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hes3Q61657 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hes3Q61657 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.27■□□□□ 0.52
Hes3Q61657 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Hes3Q61657 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hes3Q61657 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hes3Q61657 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Hes3Q61657 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hes3Q61657 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Hes3Q61657 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hes3Q61657 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hes3Q61657 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.26■□□□□ 0.51
Hes3Q61657 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hes3Q61657 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.26■□□□□ 0.51
Hes3Q61657 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hes3Q61657 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hes3Q61657 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hes3Q61657 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hes3Q61657 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hes3Q61657 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hes3Q61657 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hes3Q61657 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.25■□□□□ 0.51
Hes3Q61657 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hes3Q61657 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hes3Q61657 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hes3Q61657 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hes3Q61657 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Hes3Q61657 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hes3Q61657 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hes3Q61657 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Hes3Q61657 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hes3Q61657 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hes3Q61657 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hes3Q61657 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.24■□□□□ 0.51
Hes3Q61657 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hes3Q61657 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Hes3Q61657 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hes3Q61657 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hes3Q61657 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Hes3Q61657 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hes3Q61657 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hes3Q61657 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hes3Q61657 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hes3Q61657 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hes3Q61657 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hes3Q61657 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hes3Q61657 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hes3Q61657 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hes3Q61657 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hes3Q61657 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hes3Q61657 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hes3Q61657 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hes3Q61657 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hes3Q61657 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.21■□□□□ 0.51
Hes3Q61657 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
Hes3Q61657 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hes3Q61657 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hes3Q61657 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hes3Q61657 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms