Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Col12a1Q60847 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Col12a1Q60847 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col12a1Q60847 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col12a1Q60847 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col12a1Q60847 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.73■■□□□ 1.07
Col12a1Q60847 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col12a1Q60847 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Col12a1Q60847 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.72■■□□□ 1.07
Col12a1Q60847 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col12a1Q60847 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.72■■□□□ 1.07
Col12a1Q60847 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.72■■□□□ 1.07
Col12a1Q60847 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Col12a1Q60847 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.72■■□□□ 1.07
Col12a1Q60847 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.72■■□□□ 1.07
Col12a1Q60847 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.72■■□□□ 1.07
Col12a1Q60847 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Col12a1Q60847 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.72■■□□□ 1.07
Col12a1Q60847 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col12a1Q60847 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col12a1Q60847 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col12a1Q60847 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Col12a1Q60847 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col12a1Q60847 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.71■■□□□ 1.07
Col12a1Q60847 Gm27405-201ENSMUST00000184201 112 ntBASIC21.71■■□□□ 1.07
Col12a1Q60847 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col12a1Q60847 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.69■■□□□ 1.06
Col12a1Q60847 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
Col12a1Q60847 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Col12a1Q60847 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col12a1Q60847 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col12a1Q60847 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Col12a1Q60847 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col12a1Q60847 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col12a1Q60847 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Col12a1Q60847 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Col12a1Q60847 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col12a1Q60847 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col12a1Q60847 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Col12a1Q60847 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Col12a1Q60847 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Col12a1Q60847 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Col12a1Q60847 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.66■■□□□ 1.06
Col12a1Q60847 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
Col12a1Q60847 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.66■■□□□ 1.06
Col12a1Q60847 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Col12a1Q60847 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col12a1Q60847 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col12a1Q60847 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col12a1Q60847 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col12a1Q60847 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Col12a1Q60847 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Col12a1Q60847 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.64■■□□□ 1.06
Col12a1Q60847 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Col12a1Q60847 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Col12a1Q60847 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Col12a1Q60847 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Col12a1Q60847 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.64■■□□□ 1.05
Col12a1Q60847 Gm43137-201ENSMUST00000198052 594 ntBASIC21.64■■□□□ 1.05
Col12a1Q60847 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col12a1Q60847 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Col12a1Q60847 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Col12a1Q60847 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col12a1Q60847 Mir7075-201ENSMUST00000184187 82 ntBASIC21.63■■□□□ 1.05
Col12a1Q60847 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.63■■□□□ 1.05
Col12a1Q60847 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col12a1Q60847 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.62■■□□□ 1.05
Col12a1Q60847 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
Col12a1Q60847 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col12a1Q60847 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col12a1Q60847 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col12a1Q60847 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Col12a1Q60847 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Col12a1Q60847 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col12a1Q60847 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Col12a1Q60847 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Col12a1Q60847 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Col12a1Q60847 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col12a1Q60847 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col12a1Q60847 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col12a1Q60847 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col12a1Q60847 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.6■■□□□ 1.05
Col12a1Q60847 Gm37179-201ENSMUST00000194862 823 ntBASIC21.6■■□□□ 1.05
Col12a1Q60847 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col12a1Q60847 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col12a1Q60847 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Col12a1Q60847 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Col12a1Q60847 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.59■■□□□ 1.05
Col12a1Q60847 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.59■■□□□ 1.05
Col12a1Q60847 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.58■■□□□ 1.05
Col12a1Q60847 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Col12a1Q60847 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.58■■□□□ 1.04
Col12a1Q60847 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.57■■□□□ 1.04
Col12a1Q60847 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Col12a1Q60847 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Col12a1Q60847 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col12a1Q60847 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Col12a1Q60847 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.56■■□□□ 1.04
Col12a1Q60847 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Col12a1Q60847 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms