Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav5d-4Q5R1F6 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav5d-4Q5R1F6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
Trav5d-4Q5R1F6 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav5d-4Q5R1F6 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav5d-4Q5R1F6 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.31■□□□□ 0.52
Trav5d-4Q5R1F6 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav5d-4Q5R1F6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav5d-4Q5R1F6 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trav5d-4Q5R1F6 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav5d-4Q5R1F6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav5d-4Q5R1F6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.3■□□□□ 0.52
Trav5d-4Q5R1F6 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav5d-4Q5R1F6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav5d-4Q5R1F6 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
Trav5d-4Q5R1F6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav5d-4Q5R1F6 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav5d-4Q5R1F6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav5d-4Q5R1F6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.29■□□□□ 0.52
Trav5d-4Q5R1F6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav5d-4Q5R1F6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav5d-4Q5R1F6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav5d-4Q5R1F6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.29■□□□□ 0.52
Trav5d-4Q5R1F6 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav5d-4Q5R1F6 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav5d-4Q5R1F6 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.28■□□□□ 0.52
Trav5d-4Q5R1F6 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.28■□□□□ 0.52
Trav5d-4Q5R1F6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav5d-4Q5R1F6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Trav5d-4Q5R1F6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav5d-4Q5R1F6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav5d-4Q5R1F6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav5d-4Q5R1F6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav5d-4Q5R1F6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav5d-4Q5R1F6 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav5d-4Q5R1F6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Trav5d-4Q5R1F6 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav5d-4Q5R1F6 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav5d-4Q5R1F6 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav5d-4Q5R1F6 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav5d-4Q5R1F6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav5d-4Q5R1F6 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.26■□□□□ 0.51
Trav5d-4Q5R1F6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav5d-4Q5R1F6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.25■□□□□ 0.51
Trav5d-4Q5R1F6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.25■□□□□ 0.51
Trav5d-4Q5R1F6 Gm10420-201ENSMUST00000121713 882 ntBASIC18.25■□□□□ 0.51
Trav5d-4Q5R1F6 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.25■□□□□ 0.51
Trav5d-4Q5R1F6 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav5d-4Q5R1F6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav5d-4Q5R1F6 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.24■□□□□ 0.51
Trav5d-4Q5R1F6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.24■□□□□ 0.51
Trav5d-4Q5R1F6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.24■□□□□ 0.51
Trav5d-4Q5R1F6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav5d-4Q5R1F6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.24■□□□□ 0.51
Trav5d-4Q5R1F6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav5d-4Q5R1F6 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav5d-4Q5R1F6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav5d-4Q5R1F6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.23■□□□□ 0.51
Trav5d-4Q5R1F6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.23■□□□□ 0.51
Trav5d-4Q5R1F6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav5d-4Q5R1F6 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav5d-4Q5R1F6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav5d-4Q5R1F6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav5d-4Q5R1F6 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Trav5d-4Q5R1F6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav5d-4Q5R1F6 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav5d-4Q5R1F6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Trav5d-4Q5R1F6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav5d-4Q5R1F6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trav5d-4Q5R1F6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav5d-4Q5R1F6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trav5d-4Q5R1F6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.21■□□□□ 0.51
Trav5d-4Q5R1F6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trav5d-4Q5R1F6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trav5d-4Q5R1F6 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trav5d-4Q5R1F6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Trav5d-4Q5R1F6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.21■□□□□ 0.51
Trav5d-4Q5R1F6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trav5d-4Q5R1F6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav5d-4Q5R1F6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trav5d-4Q5R1F6 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav5d-4Q5R1F6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trav5d-4Q5R1F6 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.2■□□□□ 0.5
Trav5d-4Q5R1F6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav5d-4Q5R1F6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav5d-4Q5R1F6 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.2■□□□□ 0.5
Trav5d-4Q5R1F6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav5d-4Q5R1F6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav5d-4Q5R1F6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav5d-4Q5R1F6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav5d-4Q5R1F6 Cap2-205ENSMUST00000225824 1634 ntBASIC18.2■□□□□ 0.5
Trav5d-4Q5R1F6 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Trav5d-4Q5R1F6 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.19■□□□□ 0.5
Trav5d-4Q5R1F6 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav5d-4Q5R1F6 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav5d-4Q5R1F6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav5d-4Q5R1F6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav5d-4Q5R1F6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav5d-4Q5R1F6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav5d-4Q5R1F6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms