Protein–RNA interactions for Protein: Q5FWC9

Gm3558, Predicted gene 3558, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3558Q5FWC9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm3558Q5FWC9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Gm3558Q5FWC9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm3558Q5FWC9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm3558Q5FWC9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3558Q5FWC9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3558Q5FWC9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
Gm3558Q5FWC9 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3558Q5FWC9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.33■□□□□ 0.85
Gm3558Q5FWC9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Gm3558Q5FWC9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Gm3558Q5FWC9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm3558Q5FWC9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm3558Q5FWC9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm3558Q5FWC9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm3558Q5FWC9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Gm3558Q5FWC9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.32■□□□□ 0.84
Gm3558Q5FWC9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm3558Q5FWC9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.31■□□□□ 0.84
Gm3558Q5FWC9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gm3558Q5FWC9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm3558Q5FWC9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Gm3558Q5FWC9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm3558Q5FWC9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm3558Q5FWC9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm3558Q5FWC9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm3558Q5FWC9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Gm3558Q5FWC9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm3558Q5FWC9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm3558Q5FWC9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm3558Q5FWC9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Gm3558Q5FWC9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm3558Q5FWC9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm3558Q5FWC9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm3558Q5FWC9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm3558Q5FWC9 Gm44428-201ENSMUST00000204474 874 ntBASIC20.29■□□□□ 0.84
Gm3558Q5FWC9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm3558Q5FWC9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm3558Q5FWC9 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.28■□□□□ 0.84
Gm3558Q5FWC9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Gm3558Q5FWC9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Gm3558Q5FWC9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.27■□□□□ 0.84
Gm3558Q5FWC9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gm3558Q5FWC9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.27■□□□□ 0.84
Gm3558Q5FWC9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.27■□□□□ 0.84
Gm3558Q5FWC9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm3558Q5FWC9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm3558Q5FWC9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gm3558Q5FWC9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gm3558Q5FWC9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gm3558Q5FWC9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Gm3558Q5FWC9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm3558Q5FWC9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm3558Q5FWC9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm3558Q5FWC9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gm3558Q5FWC9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Gm3558Q5FWC9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm3558Q5FWC9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Gm3558Q5FWC9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.25■□□□□ 0.83
Gm3558Q5FWC9 Gm5921-201ENSMUST00000075898 882 ntBASIC20.25■□□□□ 0.83
Gm3558Q5FWC9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm3558Q5FWC9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm3558Q5FWC9 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.24■□□□□ 0.83
Gm3558Q5FWC9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Gm3558Q5FWC9 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.24■□□□□ 0.83
Gm3558Q5FWC9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3558Q5FWC9 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3558Q5FWC9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3558Q5FWC9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3558Q5FWC9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Gm3558Q5FWC9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Gm3558Q5FWC9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3558Q5FWC9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3558Q5FWC9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3558Q5FWC9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.23■□□□□ 0.83
Gm3558Q5FWC9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3558Q5FWC9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3558Q5FWC9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Gm3558Q5FWC9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Gm3558Q5FWC9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
Gm3558Q5FWC9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm3558Q5FWC9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm3558Q5FWC9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Gm3558Q5FWC9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3558Q5FWC9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3558Q5FWC9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3558Q5FWC9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3558Q5FWC9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Gm3558Q5FWC9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3558Q5FWC9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
Gm3558Q5FWC9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3558Q5FWC9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3558Q5FWC9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Gm3558Q5FWC9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.2■□□□□ 0.82
Gm3558Q5FWC9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3558Q5FWC9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Gm3558Q5FWC9 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.19■□□□□ 0.82
Gm3558Q5FWC9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3558Q5FWC9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3558Q5FWC9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms