Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 AC115037.1-201ENSMUST00000223391 2173 ntBASIC24.87■■□□□ 1.57
Rc3h1Q4VGL6 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Rc3h1Q4VGL6 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC24.87■■□□□ 1.57
Rc3h1Q4VGL6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Rc3h1Q4VGL6 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Rc3h1Q4VGL6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
Rc3h1Q4VGL6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC24.85■■□□□ 1.57
Rc3h1Q4VGL6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Rc3h1Q4VGL6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Rc3h1Q4VGL6 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Rc3h1Q4VGL6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Rc3h1Q4VGL6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC24.85■■□□□ 1.57
Rc3h1Q4VGL6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Rc3h1Q4VGL6 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Rc3h1Q4VGL6 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Rc3h1Q4VGL6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC24.84■■□□□ 1.57
Rc3h1Q4VGL6 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC24.84■■□□□ 1.57
Rc3h1Q4VGL6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Rc3h1Q4VGL6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Rc3h1Q4VGL6 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
Rc3h1Q4VGL6 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
Rc3h1Q4VGL6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC24.83■■□□□ 1.57
Rc3h1Q4VGL6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC24.83■■□□□ 1.57
Rc3h1Q4VGL6 Gm7417-201ENSMUST00000192950 473 ntBASIC24.83■■□□□ 1.57
Rc3h1Q4VGL6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Rc3h1Q4VGL6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC24.83■■□□□ 1.57
Rc3h1Q4VGL6 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.56
Rc3h1Q4VGL6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Rc3h1Q4VGL6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.82■■□□□ 1.56
Rc3h1Q4VGL6 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Rc3h1Q4VGL6 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Rc3h1Q4VGL6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Rc3h1Q4VGL6 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
Rc3h1Q4VGL6 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Rc3h1Q4VGL6 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Rc3h1Q4VGL6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC24.81■■□□□ 1.56
Rc3h1Q4VGL6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC24.81■■□□□ 1.56
Rc3h1Q4VGL6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC24.81■■□□□ 1.56
Rc3h1Q4VGL6 Gm40881-201ENSMUST00000223397 166 ntBASIC24.81■■□□□ 1.56
Rc3h1Q4VGL6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC24.81■■□□□ 1.56
Rc3h1Q4VGL6 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Rc3h1Q4VGL6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Rc3h1Q4VGL6 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Rc3h1Q4VGL6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Rc3h1Q4VGL6 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC24.79■■□□□ 1.56
Rc3h1Q4VGL6 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC24.79■■□□□ 1.56
Rc3h1Q4VGL6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Rc3h1Q4VGL6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC24.79■■□□□ 1.56
Rc3h1Q4VGL6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC24.77■■□□□ 1.56
Rc3h1Q4VGL6 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Rc3h1Q4VGL6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
Rc3h1Q4VGL6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC24.77■■□□□ 1.56
Rc3h1Q4VGL6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC24.77■■□□□ 1.56
Rc3h1Q4VGL6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Rc3h1Q4VGL6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
Rc3h1Q4VGL6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Rc3h1Q4VGL6 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Rc3h1Q4VGL6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Rc3h1Q4VGL6 AC158990.1-201ENSMUST00000221450 2016 ntBASIC24.76■■□□□ 1.55
Rc3h1Q4VGL6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Rc3h1Q4VGL6 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Rc3h1Q4VGL6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
Rc3h1Q4VGL6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Rc3h1Q4VGL6 Gm10399-202ENSMUST00000202768 748 ntBASIC24.75■■□□□ 1.55
Rc3h1Q4VGL6 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rc3h1Q4VGL6 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rc3h1Q4VGL6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
Rc3h1Q4VGL6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rc3h1Q4VGL6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rc3h1Q4VGL6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Rc3h1Q4VGL6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rc3h1Q4VGL6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Rc3h1Q4VGL6 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Rc3h1Q4VGL6 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC24.73■■□□□ 1.55
Rc3h1Q4VGL6 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Rc3h1Q4VGL6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Rc3h1Q4VGL6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Rc3h1Q4VGL6 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Rc3h1Q4VGL6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC24.73■■□□□ 1.55
Rc3h1Q4VGL6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
Rc3h1Q4VGL6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Rc3h1Q4VGL6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC24.72■■□□□ 1.55
Rc3h1Q4VGL6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC24.72■■□□□ 1.55
Rc3h1Q4VGL6 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Rc3h1Q4VGL6 Gm10620-201ENSMUST00000098379 1332 ntBASIC24.71■■□□□ 1.55
Rc3h1Q4VGL6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Rc3h1Q4VGL6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC24.71■■□□□ 1.55
Rc3h1Q4VGL6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC24.71■■□□□ 1.55
Rc3h1Q4VGL6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rc3h1Q4VGL6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rc3h1Q4VGL6 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rc3h1Q4VGL6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rc3h1Q4VGL6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Rc3h1Q4VGL6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.55
Rc3h1Q4VGL6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC24.7■■□□□ 1.54
Rc3h1Q4VGL6 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
Rc3h1Q4VGL6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Rc3h1Q4VGL6 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Rc3h1Q4VGL6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Rc3h1Q4VGL6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 120.2 ms