Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Lsmem1Q3UQS2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.76■■□□□ 1.07
Lsmem1Q3UQS2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lsmem1Q3UQS2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lsmem1Q3UQS2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.76■■□□□ 1.07
Lsmem1Q3UQS2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.76■■□□□ 1.07
Lsmem1Q3UQS2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lsmem1Q3UQS2 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.76■■□□□ 1.07
Lsmem1Q3UQS2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lsmem1Q3UQS2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lsmem1Q3UQS2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lsmem1Q3UQS2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Lsmem1Q3UQS2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lsmem1Q3UQS2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.75■■□□□ 1.07
Lsmem1Q3UQS2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Lsmem1Q3UQS2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Lsmem1Q3UQS2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Lsmem1Q3UQS2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lsmem1Q3UQS2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lsmem1Q3UQS2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.74■■□□□ 1.07
Lsmem1Q3UQS2 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Lsmem1Q3UQS2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lsmem1Q3UQS2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lsmem1Q3UQS2 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Lsmem1Q3UQS2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Lsmem1Q3UQS2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lsmem1Q3UQS2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Lsmem1Q3UQS2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lsmem1Q3UQS2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lsmem1Q3UQS2 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.73■■□□□ 1.07
Lsmem1Q3UQS2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
Lsmem1Q3UQS2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lsmem1Q3UQS2 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lsmem1Q3UQS2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lsmem1Q3UQS2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Lsmem1Q3UQS2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.72■■□□□ 1.07
Lsmem1Q3UQS2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lsmem1Q3UQS2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Lsmem1Q3UQS2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.72■■□□□ 1.07
Lsmem1Q3UQS2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Lsmem1Q3UQS2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.72■■□□□ 1.07
Lsmem1Q3UQS2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Lsmem1Q3UQS2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Lsmem1Q3UQS2 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lsmem1Q3UQS2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lsmem1Q3UQS2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lsmem1Q3UQS2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Lsmem1Q3UQS2 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.71■■□□□ 1.07
Lsmem1Q3UQS2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Lsmem1Q3UQS2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lsmem1Q3UQS2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lsmem1Q3UQS2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lsmem1Q3UQS2 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lsmem1Q3UQS2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.7■■□□□ 1.06
Lsmem1Q3UQS2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lsmem1Q3UQS2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
Lsmem1Q3UQS2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lsmem1Q3UQS2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Lsmem1Q3UQS2 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.69■■□□□ 1.06
Lsmem1Q3UQS2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Lsmem1Q3UQS2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lsmem1Q3UQS2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lsmem1Q3UQS2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Lsmem1Q3UQS2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.69■■□□□ 1.06
Lsmem1Q3UQS2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lsmem1Q3UQS2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lsmem1Q3UQS2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lsmem1Q3UQS2 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lsmem1Q3UQS2 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lsmem1Q3UQS2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lsmem1Q3UQS2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lsmem1Q3UQS2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Lsmem1Q3UQS2 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.67■■□□□ 1.06
Lsmem1Q3UQS2 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lsmem1Q3UQS2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
Lsmem1Q3UQS2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Lsmem1Q3UQS2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.67■■□□□ 1.06
Lsmem1Q3UQS2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lsmem1Q3UQS2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Lsmem1Q3UQS2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.66■■□□□ 1.06
Lsmem1Q3UQS2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.66■■□□□ 1.06
Lsmem1Q3UQS2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Lsmem1Q3UQS2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.66■■□□□ 1.06
Lsmem1Q3UQS2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lsmem1Q3UQS2 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.66■■□□□ 1.06
Lsmem1Q3UQS2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.66■■□□□ 1.06
Lsmem1Q3UQS2 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.66■■□□□ 1.06
Lsmem1Q3UQS2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Lsmem1Q3UQS2 Gm5812-201ENSMUST00000061073 957 ntBASIC21.65■■□□□ 1.06
Lsmem1Q3UQS2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lsmem1Q3UQS2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lsmem1Q3UQS2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lsmem1Q3UQS2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lsmem1Q3UQS2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lsmem1Q3UQS2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Lsmem1Q3UQS2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lsmem1Q3UQS2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.63■■□□□ 1.05
Lsmem1Q3UQS2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Lsmem1Q3UQS2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lsmem1Q3UQS2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms