Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf44Q3UHJ8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf44Q3UHJ8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.62■□□□□ 0.89
Rnf44Q3UHJ8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Rnf44Q3UHJ8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
Rnf44Q3UHJ8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf44Q3UHJ8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf44Q3UHJ8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf44Q3UHJ8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Rnf44Q3UHJ8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf44Q3UHJ8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf44Q3UHJ8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf44Q3UHJ8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Rnf44Q3UHJ8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.61■□□□□ 0.89
Rnf44Q3UHJ8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf44Q3UHJ8 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf44Q3UHJ8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf44Q3UHJ8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf44Q3UHJ8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf44Q3UHJ8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Rnf44Q3UHJ8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf44Q3UHJ8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf44Q3UHJ8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rnf44Q3UHJ8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.59■□□□□ 0.89
Rnf44Q3UHJ8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf44Q3UHJ8 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf44Q3UHJ8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf44Q3UHJ8 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf44Q3UHJ8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rnf44Q3UHJ8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf44Q3UHJ8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Rnf44Q3UHJ8 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf44Q3UHJ8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf44Q3UHJ8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Rnf44Q3UHJ8 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf44Q3UHJ8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf44Q3UHJ8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Rnf44Q3UHJ8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Rnf44Q3UHJ8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.56■□□□□ 0.88
Rnf44Q3UHJ8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf44Q3UHJ8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf44Q3UHJ8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf44Q3UHJ8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf44Q3UHJ8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Rnf44Q3UHJ8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf44Q3UHJ8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rnf44Q3UHJ8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.55■□□□□ 0.88
Rnf44Q3UHJ8 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf44Q3UHJ8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Rnf44Q3UHJ8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Rnf44Q3UHJ8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf44Q3UHJ8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf44Q3UHJ8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.54■□□□□ 0.88
Rnf44Q3UHJ8 Gm5812-201ENSMUST00000061073 957 ntBASIC20.54■□□□□ 0.88
Rnf44Q3UHJ8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf44Q3UHJ8 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Rnf44Q3UHJ8 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.53■□□□□ 0.88
Rnf44Q3UHJ8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf44Q3UHJ8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Rnf44Q3UHJ8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf44Q3UHJ8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf44Q3UHJ8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf44Q3UHJ8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.53■□□□□ 0.88
Rnf44Q3UHJ8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf44Q3UHJ8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf44Q3UHJ8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.52■□□□□ 0.88
Rnf44Q3UHJ8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Rnf44Q3UHJ8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf44Q3UHJ8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.52■□□□□ 0.88
Rnf44Q3UHJ8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf44Q3UHJ8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf44Q3UHJ8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rnf44Q3UHJ8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf44Q3UHJ8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf44Q3UHJ8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf44Q3UHJ8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Rnf44Q3UHJ8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf44Q3UHJ8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf44Q3UHJ8 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.5■□□□□ 0.87
Rnf44Q3UHJ8 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.5■□□□□ 0.87
Rnf44Q3UHJ8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Rnf44Q3UHJ8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf44Q3UHJ8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf44Q3UHJ8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.5■□□□□ 0.87
Rnf44Q3UHJ8 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf44Q3UHJ8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.5■□□□□ 0.87
Rnf44Q3UHJ8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Rnf44Q3UHJ8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.49■□□□□ 0.87
Rnf44Q3UHJ8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf44Q3UHJ8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf44Q3UHJ8 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.49■□□□□ 0.87
Rnf44Q3UHJ8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf44Q3UHJ8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.49■□□□□ 0.87
Rnf44Q3UHJ8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Rnf44Q3UHJ8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Rnf44Q3UHJ8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Rnf44Q3UHJ8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf44Q3UHJ8 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf44Q3UHJ8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf44Q3UHJ8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms