Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Q3KNL4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Q3KNL4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Q3KNL4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q3KNL4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q3KNL4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.88■□□□□ 0.93
Q3KNL4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Q3KNL4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q3KNL4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Q3KNL4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q3KNL4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Q3KNL4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Q3KNL4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q3KNL4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q3KNL4 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Q3KNL4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q3KNL4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Q3KNL4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q3KNL4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q3KNL4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.87■□□□□ 0.93
Q3KNL4 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
Q3KNL4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.87■□□□□ 0.93
Q3KNL4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Q3KNL4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Q3KNL4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Q3KNL4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Q3KNL4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Q3KNL4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Q3KNL4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.85■□□□□ 0.93
Q3KNL4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Q3KNL4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Q3KNL4 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Q3KNL4 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Q3KNL4 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Q3KNL4 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.84■□□□□ 0.93
Q3KNL4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Q3KNL4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Q3KNL4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.84■□□□□ 0.93
Q3KNL4 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Q3KNL4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Q3KNL4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Q3KNL4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Q3KNL4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Q3KNL4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Q3KNL4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Q3KNL4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Q3KNL4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Q3KNL4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Q3KNL4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.82■□□□□ 0.92
Q3KNL4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Q3KNL4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Q3KNL4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Q3KNL4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Q3KNL4 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.81■□□□□ 0.92
Q3KNL4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Q3KNL4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Q3KNL4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Q3KNL4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Q3KNL4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.8■□□□□ 0.92
Q3KNL4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Q3KNL4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.8■□□□□ 0.92
Q3KNL4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Q3KNL4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Q3KNL4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Q3KNL4 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Q3KNL4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Q3KNL4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Q3KNL4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Q3KNL4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
Q3KNL4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Q3KNL4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Q3KNL4 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Q3KNL4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Q3KNL4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Q3KNL4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Q3KNL4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Q3KNL4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Q3KNL4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Q3KNL4 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Q3KNL4 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.77■□□□□ 0.92
Q3KNL4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Q3KNL4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Q3KNL4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Q3KNL4 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Q3KNL4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q3KNL4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Q3KNL4 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Q3KNL4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Q3KNL4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Q3KNL4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.74■□□□□ 0.91
Q3KNL4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Q3KNL4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Q3KNL4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Q3KNL4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Q3KNL4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Q3KNL4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Q3KNL4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Q3KNL4 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Q3KNL4 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Q3KNL4 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms