Protein–RNA interactions for Protein: Q2WF71

Lrfn1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, mousemouse

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrfn1Q2WF71 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lrfn1Q2WF71 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lrfn1Q2WF71 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lrfn1Q2WF71 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lrfn1Q2WF71 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lrfn1Q2WF71 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lrfn1Q2WF71 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Lrfn1Q2WF71 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Lrfn1Q2WF71 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lrfn1Q2WF71 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Lrfn1Q2WF71 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lrfn1Q2WF71 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lrfn1Q2WF71 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lrfn1Q2WF71 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lrfn1Q2WF71 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.44■□□□□ 0.7
Lrfn1Q2WF71 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.44■□□□□ 0.7
Lrfn1Q2WF71 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lrfn1Q2WF71 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lrfn1Q2WF71 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.43■□□□□ 0.7
Lrfn1Q2WF71 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lrfn1Q2WF71 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lrfn1Q2WF71 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.43■□□□□ 0.7
Lrfn1Q2WF71 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Lrfn1Q2WF71 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lrfn1Q2WF71 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lrfn1Q2WF71 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Lrfn1Q2WF71 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lrfn1Q2WF71 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Lrfn1Q2WF71 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrfn1Q2WF71 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.42■□□□□ 0.7
Lrfn1Q2WF71 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lrfn1Q2WF71 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lrfn1Q2WF71 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrfn1Q2WF71 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lrfn1Q2WF71 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrfn1Q2WF71 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrfn1Q2WF71 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lrfn1Q2WF71 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrfn1Q2WF71 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Lrfn1Q2WF71 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrfn1Q2WF71 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Lrfn1Q2WF71 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.41■□□□□ 0.7
Lrfn1Q2WF71 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrfn1Q2WF71 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrfn1Q2WF71 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrfn1Q2WF71 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lrfn1Q2WF71 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Lrfn1Q2WF71 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lrfn1Q2WF71 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lrfn1Q2WF71 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lrfn1Q2WF71 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.4■□□□□ 0.7
Lrfn1Q2WF71 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lrfn1Q2WF71 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.4■□□□□ 0.7
Lrfn1Q2WF71 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.39■□□□□ 0.69
Lrfn1Q2WF71 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.39■□□□□ 0.69
Lrfn1Q2WF71 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrfn1Q2WF71 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrfn1Q2WF71 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrfn1Q2WF71 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrfn1Q2WF71 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrfn1Q2WF71 Mir3960-201ENSMUST00000198213 73 ntBASIC19.38■□□□□ 0.69
Lrfn1Q2WF71 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrfn1Q2WF71 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrfn1Q2WF71 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrfn1Q2WF71 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrfn1Q2WF71 Gm11175-201ENSMUST00000116172 543 ntBASIC19.37■□□□□ 0.69
Lrfn1Q2WF71 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrfn1Q2WF71 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Lrfn1Q2WF71 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
Lrfn1Q2WF71 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lrfn1Q2WF71 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrfn1Q2WF71 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrfn1Q2WF71 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.36■□□□□ 0.69
Lrfn1Q2WF71 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Lrfn1Q2WF71 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lrfn1Q2WF71 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lrfn1Q2WF71 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.35■□□□□ 0.69
Lrfn1Q2WF71 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrfn1Q2WF71 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrfn1Q2WF71 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.35■□□□□ 0.69
Lrfn1Q2WF71 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Lrfn1Q2WF71 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrfn1Q2WF71 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Lrfn1Q2WF71 Gm45364-201ENSMUST00000210883 159 ntBASIC19.34■□□□□ 0.69
Lrfn1Q2WF71 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrfn1Q2WF71 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrfn1Q2WF71 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrfn1Q2WF71 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Lrfn1Q2WF71 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Lrfn1Q2WF71 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Lrfn1Q2WF71 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lrfn1Q2WF71 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrfn1Q2WF71 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrfn1Q2WF71 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrfn1Q2WF71 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrfn1Q2WF71 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrfn1Q2WF71 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrfn1Q2WF71 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrfn1Q2WF71 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.32■□□□□ 0.68
Lrfn1Q2WF71 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms