Protein–RNA interactions for Protein: Q2VWQ2

Nell1, Protein kinase C-binding protein NELL1, mousemouse

Predictions only

Length 810 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nell1Q2VWQ2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Nell1Q2VWQ2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Nell1Q2VWQ2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nell1Q2VWQ2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.79■□□□□ 0.92
Nell1Q2VWQ2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Nell1Q2VWQ2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nell1Q2VWQ2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Nell1Q2VWQ2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nell1Q2VWQ2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nell1Q2VWQ2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nell1Q2VWQ2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nell1Q2VWQ2 Gm27454-201ENSMUST00000185090 204 ntBASIC20.78■□□□□ 0.92
Nell1Q2VWQ2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nell1Q2VWQ2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nell1Q2VWQ2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.77■□□□□ 0.92
Nell1Q2VWQ2 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nell1Q2VWQ2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nell1Q2VWQ2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.77■□□□□ 0.92
Nell1Q2VWQ2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nell1Q2VWQ2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nell1Q2VWQ2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nell1Q2VWQ2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Nell1Q2VWQ2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.77■□□□□ 0.92
Nell1Q2VWQ2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.77■□□□□ 0.92
Nell1Q2VWQ2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nell1Q2VWQ2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Nell1Q2VWQ2 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Nell1Q2VWQ2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nell1Q2VWQ2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nell1Q2VWQ2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Nell1Q2VWQ2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nell1Q2VWQ2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nell1Q2VWQ2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.76■□□□□ 0.91
Nell1Q2VWQ2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nell1Q2VWQ2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nell1Q2VWQ2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nell1Q2VWQ2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nell1Q2VWQ2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nell1Q2VWQ2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nell1Q2VWQ2 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.75■□□□□ 0.91
Nell1Q2VWQ2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Nell1Q2VWQ2 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nell1Q2VWQ2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nell1Q2VWQ2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nell1Q2VWQ2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Nell1Q2VWQ2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Nell1Q2VWQ2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nell1Q2VWQ2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nell1Q2VWQ2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nell1Q2VWQ2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nell1Q2VWQ2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nell1Q2VWQ2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nell1Q2VWQ2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nell1Q2VWQ2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nell1Q2VWQ2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nell1Q2VWQ2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nell1Q2VWQ2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nell1Q2VWQ2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nell1Q2VWQ2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nell1Q2VWQ2 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.73■□□□□ 0.91
Nell1Q2VWQ2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Nell1Q2VWQ2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nell1Q2VWQ2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nell1Q2VWQ2 Gm10399-202ENSMUST00000202768 748 ntBASIC20.73■□□□□ 0.91
Nell1Q2VWQ2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nell1Q2VWQ2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nell1Q2VWQ2 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Nell1Q2VWQ2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nell1Q2VWQ2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nell1Q2VWQ2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nell1Q2VWQ2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Nell1Q2VWQ2 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.72■□□□□ 0.91
Nell1Q2VWQ2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nell1Q2VWQ2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nell1Q2VWQ2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nell1Q2VWQ2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nell1Q2VWQ2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Nell1Q2VWQ2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nell1Q2VWQ2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.71■□□□□ 0.91
Nell1Q2VWQ2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nell1Q2VWQ2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nell1Q2VWQ2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.71■□□□□ 0.91
Nell1Q2VWQ2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.71■□□□□ 0.91
Nell1Q2VWQ2 Gm45417-201ENSMUST00000209533 758 ntBASIC20.71■□□□□ 0.91
Nell1Q2VWQ2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nell1Q2VWQ2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nell1Q2VWQ2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nell1Q2VWQ2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nell1Q2VWQ2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nell1Q2VWQ2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.7■□□□□ 0.91
Nell1Q2VWQ2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Nell1Q2VWQ2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.7■□□□□ 0.9
Nell1Q2VWQ2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Nell1Q2VWQ2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nell1Q2VWQ2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.7■□□□□ 0.9
Nell1Q2VWQ2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nell1Q2VWQ2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nell1Q2VWQ2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nell1Q2VWQ2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nell1Q2VWQ2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms