Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pkd1l3Q2EG98 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pkd1l3Q2EG98 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pkd1l3Q2EG98 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pkd1l3Q2EG98 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pkd1l3Q2EG98 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.19■□□□□ 0.66
Pkd1l3Q2EG98 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pkd1l3Q2EG98 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pkd1l3Q2EG98 Gm21956-201ENSMUST00000179946 522 ntBASIC19.18■□□□□ 0.66
Pkd1l3Q2EG98 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pkd1l3Q2EG98 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pkd1l3Q2EG98 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pkd1l3Q2EG98 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pkd1l3Q2EG98 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Pkd1l3Q2EG98 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.17■□□□□ 0.66
Pkd1l3Q2EG98 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pkd1l3Q2EG98 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Pkd1l3Q2EG98 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pkd1l3Q2EG98 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.17■□□□□ 0.66
Pkd1l3Q2EG98 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pkd1l3Q2EG98 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pkd1l3Q2EG98 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pkd1l3Q2EG98 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pkd1l3Q2EG98 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pkd1l3Q2EG98 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pkd1l3Q2EG98 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pkd1l3Q2EG98 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pkd1l3Q2EG98 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pkd1l3Q2EG98 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pkd1l3Q2EG98 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.16■□□□□ 0.66
Pkd1l3Q2EG98 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Pkd1l3Q2EG98 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pkd1l3Q2EG98 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pkd1l3Q2EG98 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pkd1l3Q2EG98 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pkd1l3Q2EG98 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pkd1l3Q2EG98 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.15■□□□□ 0.66
Pkd1l3Q2EG98 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.14■□□□□ 0.66
Pkd1l3Q2EG98 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Pkd1l3Q2EG98 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pkd1l3Q2EG98 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pkd1l3Q2EG98 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Pkd1l3Q2EG98 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pkd1l3Q2EG98 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.14■□□□□ 0.65
Pkd1l3Q2EG98 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.13■□□□□ 0.65
Pkd1l3Q2EG98 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.13■□□□□ 0.65
Pkd1l3Q2EG98 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pkd1l3Q2EG98 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pkd1l3Q2EG98 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Pkd1l3Q2EG98 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pkd1l3Q2EG98 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.13■□□□□ 0.65
Pkd1l3Q2EG98 Gm12922-201ENSMUST00000120626 809 ntBASIC19.13■□□□□ 0.65
Pkd1l3Q2EG98 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pkd1l3Q2EG98 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pkd1l3Q2EG98 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.13■□□□□ 0.65
Pkd1l3Q2EG98 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pkd1l3Q2EG98 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Pkd1l3Q2EG98 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Pkd1l3Q2EG98 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pkd1l3Q2EG98 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pkd1l3Q2EG98 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Pkd1l3Q2EG98 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.12■□□□□ 0.65
Pkd1l3Q2EG98 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pkd1l3Q2EG98 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pkd1l3Q2EG98 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pkd1l3Q2EG98 Gm22238-201ENSMUST00000175222 88 ntBASIC19.11■□□□□ 0.65
Pkd1l3Q2EG98 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pkd1l3Q2EG98 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pkd1l3Q2EG98 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.11■□□□□ 0.65
Pkd1l3Q2EG98 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pkd1l3Q2EG98 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Pkd1l3Q2EG98 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pkd1l3Q2EG98 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.1■□□□□ 0.65
Pkd1l3Q2EG98 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pkd1l3Q2EG98 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.1■□□□□ 0.65
Pkd1l3Q2EG98 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pkd1l3Q2EG98 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pkd1l3Q2EG98 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pkd1l3Q2EG98 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pkd1l3Q2EG98 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.09■□□□□ 0.65
Pkd1l3Q2EG98 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pkd1l3Q2EG98 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pkd1l3Q2EG98 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pkd1l3Q2EG98 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.09■□□□□ 0.65
Pkd1l3Q2EG98 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pkd1l3Q2EG98 Gm9847-201ENSMUST00000052528 599 ntBASIC19.09■□□□□ 0.65
Pkd1l3Q2EG98 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pkd1l3Q2EG98 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Pkd1l3Q2EG98 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pkd1l3Q2EG98 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pkd1l3Q2EG98 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.08■□□□□ 0.64
Pkd1l3Q2EG98 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pkd1l3Q2EG98 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pkd1l3Q2EG98 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pkd1l3Q2EG98 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pkd1l3Q2EG98 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pkd1l3Q2EG98 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pkd1l3Q2EG98 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pkd1l3Q2EG98 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pkd1l3Q2EG98 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms