Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Traf6P70196 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Traf6P70196 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Traf6P70196 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Traf6P70196 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Traf6P70196 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Traf6P70196 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Traf6P70196 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Traf6P70196 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Traf6P70196 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Traf6P70196 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Traf6P70196 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Traf6P70196 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Traf6P70196 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Traf6P70196 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.89■□□□□ 0.93
Traf6P70196 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Traf6P70196 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Traf6P70196 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Traf6P70196 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Traf6P70196 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.88■□□□□ 0.93
Traf6P70196 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Traf6P70196 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.88■□□□□ 0.93
Traf6P70196 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Traf6P70196 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Traf6P70196 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Traf6P70196 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Traf6P70196 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Traf6P70196 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.87■□□□□ 0.93
Traf6P70196 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Traf6P70196 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Traf6P70196 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.87■□□□□ 0.93
Traf6P70196 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.87■□□□□ 0.93
Traf6P70196 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Traf6P70196 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.86■□□□□ 0.93
Traf6P70196 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Traf6P70196 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Traf6P70196 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Traf6P70196 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Traf6P70196 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Traf6P70196 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Traf6P70196 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.85■□□□□ 0.93
Traf6P70196 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Traf6P70196 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Traf6P70196 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Traf6P70196 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Traf6P70196 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Traf6P70196 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Traf6P70196 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Traf6P70196 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Traf6P70196 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Traf6P70196 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Traf6P70196 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Traf6P70196 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Traf6P70196 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Traf6P70196 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Traf6P70196 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.83■□□□□ 0.93
Traf6P70196 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Traf6P70196 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Traf6P70196 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Traf6P70196 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Traf6P70196 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Traf6P70196 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Traf6P70196 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Traf6P70196 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Traf6P70196 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Traf6P70196 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Traf6P70196 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Traf6P70196 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Traf6P70196 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Traf6P70196 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Traf6P70196 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Traf6P70196 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Traf6P70196 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Traf6P70196 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Traf6P70196 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.81■□□□□ 0.92
Traf6P70196 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Traf6P70196 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Traf6P70196 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Traf6P70196 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Traf6P70196 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.81■□□□□ 0.92
Traf6P70196 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Traf6P70196 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Traf6P70196 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Traf6P70196 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Traf6P70196 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Traf6P70196 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Traf6P70196 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.8■□□□□ 0.92
Traf6P70196 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.8■□□□□ 0.92
Traf6P70196 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Traf6P70196 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Traf6P70196 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Traf6P70196 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Traf6P70196 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Traf6P70196 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Traf6P70196 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.79■□□□□ 0.92
Traf6P70196 Cap2-205ENSMUST00000225824 1634 ntBASIC20.79■□□□□ 0.92
Traf6P70196 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.79■□□□□ 0.92
Traf6P70196 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Traf6P70196 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.79■□□□□ 0.92
Traf6P70196 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms