Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.79■□□□□ 0.44
Cpne2P59108 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.79■□□□□ 0.44
Cpne2P59108 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpne2P59108 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cpne2P59108 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.79■□□□□ 0.44
Cpne2P59108 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
Cpne2P59108 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpne2P59108 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.79■□□□□ 0.44
Cpne2P59108 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpne2P59108 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.78■□□□□ 0.44
Cpne2P59108 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cpne2P59108 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cpne2P59108 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cpne2P59108 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Cpne2P59108 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cpne2P59108 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cpne2P59108 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.77■□□□□ 0.44
Cpne2P59108 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cpne2P59108 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Cpne2P59108 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Cpne2P59108 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cpne2P59108 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.76■□□□□ 0.43
Cpne2P59108 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cpne2P59108 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cpne2P59108 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.75■□□□□ 0.43
Cpne2P59108 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cpne2P59108 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cpne2P59108 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpne2P59108 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.75■□□□□ 0.43
Cpne2P59108 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.75■□□□□ 0.43
Cpne2P59108 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cpne2P59108 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpne2P59108 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpne2P59108 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cpne2P59108 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cpne2P59108 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cpne2P59108 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cpne2P59108 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpne2P59108 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpne2P59108 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpne2P59108 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Cpne2P59108 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpne2P59108 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpne2P59108 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Cpne2P59108 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.73■□□□□ 0.43
Cpne2P59108 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.73■□□□□ 0.43
Cpne2P59108 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpne2P59108 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpne2P59108 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Cpne2P59108 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpne2P59108 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpne2P59108 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpne2P59108 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne2P59108 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.72■□□□□ 0.43
Cpne2P59108 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne2P59108 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne2P59108 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne2P59108 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne2P59108 Terc-201ENSMUST00000082862 423 ntBASIC17.72■□□□□ 0.43
Cpne2P59108 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne2P59108 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne2P59108 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.72■□□□□ 0.43
Cpne2P59108 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpne2P59108 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpne2P59108 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.71■□□□□ 0.43
Cpne2P59108 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cpne2P59108 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpne2P59108 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpne2P59108 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cpne2P59108 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne2P59108 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne2P59108 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne2P59108 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.7■□□□□ 0.42
Cpne2P59108 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.7■□□□□ 0.42
Cpne2P59108 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne2P59108 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne2P59108 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne2P59108 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cpne2P59108 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpne2P59108 Gm22567-201ENSMUST00000175542 342 ntBASIC17.69■□□□□ 0.42
Cpne2P59108 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.69■□□□□ 0.42
Cpne2P59108 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.69■□□□□ 0.42
Cpne2P59108 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cpne2P59108 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpne2P59108 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne2P59108 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cpne2P59108 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne2P59108 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.68■□□□□ 0.42
Cpne2P59108 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne2P59108 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne2P59108 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne2P59108 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne2P59108 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne2P59108 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne2P59108 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne2P59108 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.68■□□□□ 0.42
Cpne2P59108 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.67■□□□□ 0.42
Cpne2P59108 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne2P59108 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne2P59108 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms