Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Limk1P53668 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Limk1P53668 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
Limk1P53668 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.89■□□□□ 0.93
Limk1P53668 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Limk1P53668 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Limk1P53668 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Limk1P53668 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.88■□□□□ 0.93
Limk1P53668 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Limk1P53668 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.88■□□□□ 0.93
Limk1P53668 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Limk1P53668 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Limk1P53668 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Limk1P53668 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Limk1P53668 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Limk1P53668 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Limk1P53668 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Limk1P53668 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Limk1P53668 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Limk1P53668 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Limk1P53668 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.86■□□□□ 0.93
Limk1P53668 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Limk1P53668 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Limk1P53668 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Limk1P53668 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Limk1P53668 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Limk1P53668 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Limk1P53668 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.85■□□□□ 0.93
Limk1P53668 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Limk1P53668 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Limk1P53668 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Limk1P53668 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Limk1P53668 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Limk1P53668 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.84■□□□□ 0.93
Limk1P53668 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Limk1P53668 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
Limk1P53668 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
Limk1P53668 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Limk1P53668 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.83■□□□□ 0.93
Limk1P53668 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Limk1P53668 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Limk1P53668 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Limk1P53668 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Limk1P53668 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.82■□□□□ 0.92
Limk1P53668 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.82■□□□□ 0.92
Limk1P53668 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Limk1P53668 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.82■□□□□ 0.92
Limk1P53668 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.82■□□□□ 0.92
Limk1P53668 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Limk1P53668 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Limk1P53668 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Limk1P53668 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Limk1P53668 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Limk1P53668 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Limk1P53668 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Limk1P53668 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Limk1P53668 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.81■□□□□ 0.92
Limk1P53668 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Limk1P53668 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Limk1P53668 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Limk1P53668 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Limk1P53668 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Limk1P53668 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Limk1P53668 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Limk1P53668 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.8■□□□□ 0.92
Limk1P53668 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Limk1P53668 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Limk1P53668 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Limk1P53668 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Limk1P53668 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Limk1P53668 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.79■□□□□ 0.92
Limk1P53668 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Limk1P53668 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Limk1P53668 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Limk1P53668 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Limk1P53668 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.78■□□□□ 0.92
Limk1P53668 Gm29257-201ENSMUST00000186115 639 ntBASIC20.78■□□□□ 0.92
Limk1P53668 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Limk1P53668 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Limk1P53668 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Limk1P53668 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.78■□□□□ 0.92
Limk1P53668 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Limk1P53668 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
Limk1P53668 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Limk1P53668 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Limk1P53668 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Limk1P53668 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Limk1P53668 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Limk1P53668 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.77■□□□□ 0.92
Limk1P53668 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Limk1P53668 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Limk1P53668 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Limk1P53668 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Limk1P53668 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Limk1P53668 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Limk1P53668 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Limk1P53668 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Limk1P53668 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Limk1P53668 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Limk1P53668 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms