Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmga2P52927 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Hmga2P52927 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hmga2P52927 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Hmga2P52927 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Hmga2P52927 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Hmga2P52927 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hmga2P52927 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hmga2P52927 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Hmga2P52927 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmga2P52927 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Hmga2P52927 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmga2P52927 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hmga2P52927 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmga2P52927 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.13■□□□□ 0.49
Hmga2P52927 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.13■□□□□ 0.49
Hmga2P52927 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmga2P52927 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Hmga2P52927 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmga2P52927 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hmga2P52927 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hmga2P52927 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hmga2P52927 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hmga2P52927 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hmga2P52927 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hmga2P52927 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hmga2P52927 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hmga2P52927 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.12■□□□□ 0.49
Hmga2P52927 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmga2P52927 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmga2P52927 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmga2P52927 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmga2P52927 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmga2P52927 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Hmga2P52927 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmga2P52927 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmga2P52927 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmga2P52927 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hmga2P52927 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hmga2P52927 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hmga2P52927 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.1■□□□□ 0.49
Hmga2P52927 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.1■□□□□ 0.49
Hmga2P52927 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hmga2P52927 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Hmga2P52927 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Hmga2P52927 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hmga2P52927 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hmga2P52927 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.09■□□□□ 0.49
Hmga2P52927 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hmga2P52927 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Hmga2P52927 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Hmga2P52927 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hmga2P52927 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.09■□□□□ 0.49
Hmga2P52927 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmga2P52927 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmga2P52927 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmga2P52927 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Hmga2P52927 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hmga2P52927 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Hmga2P52927 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hmga2P52927 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Hmga2P52927 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hmga2P52927 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hmga2P52927 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hmga2P52927 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hmga2P52927 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hmga2P52927 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hmga2P52927 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Hmga2P52927 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Hmga2P52927 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hmga2P52927 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.07■□□□□ 0.48
Hmga2P52927 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hmga2P52927 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hmga2P52927 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmga2P52927 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmga2P52927 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmga2P52927 Gm44428-201ENSMUST00000204474 874 ntBASIC18.06■□□□□ 0.48
Hmga2P52927 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Hmga2P52927 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Hmga2P52927 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hmga2P52927 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmga2P52927 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmga2P52927 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Hmga2P52927 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmga2P52927 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Hmga2P52927 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmga2P52927 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmga2P52927 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmga2P52927 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.05■□□□□ 0.48
Hmga2P52927 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.05■□□□□ 0.48
Hmga2P52927 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmga2P52927 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmga2P52927 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmga2P52927 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmga2P52927 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hmga2P52927 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmga2P52927 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmga2P52927 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmga2P52927 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hmga2P52927 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms