Protein–RNA interactions for Protein: P43024

Cox6a1, Cytochrome c oxidase subunit 6A1, mitochondrial, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cox6a1P43024 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cox6a1P43024 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cox6a1P43024 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cox6a1P43024 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cox6a1P43024 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cox6a1P43024 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cox6a1P43024 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cox6a1P43024 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cox6a1P43024 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cox6a1P43024 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cox6a1P43024 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cox6a1P43024 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cox6a1P43024 Gm12922-201ENSMUST00000120626 809 ntBASIC18.16■□□□□ 0.5
Cox6a1P43024 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.16■□□□□ 0.5
Cox6a1P43024 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cox6a1P43024 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cox6a1P43024 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.16■□□□□ 0.5
Cox6a1P43024 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cox6a1P43024 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cox6a1P43024 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cox6a1P43024 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cox6a1P43024 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cox6a1P43024 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cox6a1P43024 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.15■□□□□ 0.5
Cox6a1P43024 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cox6a1P43024 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cox6a1P43024 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cox6a1P43024 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cox6a1P43024 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cox6a1P43024 Gm21956-201ENSMUST00000179946 522 ntBASIC18.14■□□□□ 0.49
Cox6a1P43024 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cox6a1P43024 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
Cox6a1P43024 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cox6a1P43024 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cox6a1P43024 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cox6a1P43024 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cox6a1P43024 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cox6a1P43024 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cox6a1P43024 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cox6a1P43024 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cox6a1P43024 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cox6a1P43024 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cox6a1P43024 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.13■□□□□ 0.49
Cox6a1P43024 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.13■□□□□ 0.49
Cox6a1P43024 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cox6a1P43024 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Cox6a1P43024 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
Cox6a1P43024 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cox6a1P43024 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cox6a1P43024 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.11■□□□□ 0.49
Cox6a1P43024 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cox6a1P43024 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Cox6a1P43024 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cox6a1P43024 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cox6a1P43024 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cox6a1P43024 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cox6a1P43024 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.11■□□□□ 0.49
Cox6a1P43024 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cox6a1P43024 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cox6a1P43024 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cox6a1P43024 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cox6a1P43024 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cox6a1P43024 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cox6a1P43024 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cox6a1P43024 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cox6a1P43024 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.1■□□□□ 0.49
Cox6a1P43024 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cox6a1P43024 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.1■□□□□ 0.49
Cox6a1P43024 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cox6a1P43024 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.1■□□□□ 0.49
Cox6a1P43024 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cox6a1P43024 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cox6a1P43024 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cox6a1P43024 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.09■□□□□ 0.49
Cox6a1P43024 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
Cox6a1P43024 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.09■□□□□ 0.49
Cox6a1P43024 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.09■□□□□ 0.49
Cox6a1P43024 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cox6a1P43024 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cox6a1P43024 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cox6a1P43024 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Cox6a1P43024 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.08■□□□□ 0.48
Cox6a1P43024 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cox6a1P43024 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.08■□□□□ 0.48
Cox6a1P43024 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cox6a1P43024 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Cox6a1P43024 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cox6a1P43024 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cox6a1P43024 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cox6a1P43024 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cox6a1P43024 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.07■□□□□ 0.48
Cox6a1P43024 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.07■□□□□ 0.48
Cox6a1P43024 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cox6a1P43024 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Cox6a1P43024 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cox6a1P43024 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cox6a1P43024 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cox6a1P43024 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cox6a1P43024 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cox6a1P43024 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 140.2 ms