Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdkn1aP39689 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdkn1aP39689 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cdkn1aP39689 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Cdkn1aP39689 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.61■□□□□ 0.41
Cdkn1aP39689 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdkn1aP39689 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdkn1aP39689 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdkn1aP39689 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdkn1aP39689 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Cdkn1aP39689 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdkn1aP39689 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cdkn1aP39689 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdkn1aP39689 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cdkn1aP39689 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.6■□□□□ 0.41
Cdkn1aP39689 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.6■□□□□ 0.41
Cdkn1aP39689 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdkn1aP39689 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdkn1aP39689 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdkn1aP39689 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdkn1aP39689 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdkn1aP39689 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdkn1aP39689 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdkn1aP39689 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdkn1aP39689 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.59■□□□□ 0.41
Cdkn1aP39689 Gm7417-201ENSMUST00000192950 473 ntBASIC17.59■□□□□ 0.41
Cdkn1aP39689 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.59■□□□□ 0.41
Cdkn1aP39689 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdkn1aP39689 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdkn1aP39689 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdkn1aP39689 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.58■□□□□ 0.41
Cdkn1aP39689 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdkn1aP39689 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Cdkn1aP39689 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cdkn1aP39689 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdkn1aP39689 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cdkn1aP39689 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cdkn1aP39689 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cdkn1aP39689 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdkn1aP39689 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdkn1aP39689 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cdkn1aP39689 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdkn1aP39689 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.57■□□□□ 0.4
Cdkn1aP39689 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.57■□□□□ 0.4
Cdkn1aP39689 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.57■□□□□ 0.4
Cdkn1aP39689 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cdkn1aP39689 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Cdkn1aP39689 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkn1aP39689 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cdkn1aP39689 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Cdkn1aP39689 Gm40881-201ENSMUST00000223397 166 ntBASIC17.56■□□□□ 0.4
Cdkn1aP39689 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkn1aP39689 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkn1aP39689 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkn1aP39689 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkn1aP39689 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkn1aP39689 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkn1aP39689 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkn1aP39689 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.55■□□□□ 0.4
Cdkn1aP39689 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkn1aP39689 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkn1aP39689 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkn1aP39689 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.55■□□□□ 0.4
Cdkn1aP39689 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkn1aP39689 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkn1aP39689 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.54■□□□□ 0.4
Cdkn1aP39689 Gm10399-202ENSMUST00000202768 748 ntBASIC17.54■□□□□ 0.4
Cdkn1aP39689 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkn1aP39689 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkn1aP39689 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkn1aP39689 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cdkn1aP39689 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkn1aP39689 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkn1aP39689 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkn1aP39689 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkn1aP39689 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkn1aP39689 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkn1aP39689 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkn1aP39689 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.53■□□□□ 0.4
Cdkn1aP39689 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.53■□□□□ 0.4
Cdkn1aP39689 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkn1aP39689 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cdkn1aP39689 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkn1aP39689 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkn1aP39689 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkn1aP39689 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdkn1aP39689 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdkn1aP39689 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdkn1aP39689 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdkn1aP39689 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cdkn1aP39689 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.52■□□□□ 0.4
Cdkn1aP39689 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdkn1aP39689 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdkn1aP39689 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdkn1aP39689 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cdkn1aP39689 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdkn1aP39689 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cdkn1aP39689 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.51■□□□□ 0.39
Cdkn1aP39689 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdkn1aP39689 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms