Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.22■□□□□ 0.99
Nckap1P28660 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nckap1P28660 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nckap1P28660 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nckap1P28660 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nckap1P28660 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.21■□□□□ 0.99
Nckap1P28660 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.21■□□□□ 0.99
Nckap1P28660 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nckap1P28660 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Nckap1P28660 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nckap1P28660 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nckap1P28660 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Nckap1P28660 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.2■□□□□ 0.98
Nckap1P28660 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nckap1P28660 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Nckap1P28660 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Nckap1P28660 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.19■□□□□ 0.98
Nckap1P28660 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.19■□□□□ 0.98
Nckap1P28660 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nckap1P28660 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nckap1P28660 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nckap1P28660 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Nckap1P28660 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Nckap1P28660 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nckap1P28660 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nckap1P28660 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.18■□□□□ 0.98
Nckap1P28660 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nckap1P28660 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nckap1P28660 Gm13241-201ENSMUST00000094493 780 ntBASIC21.18■□□□□ 0.98
Nckap1P28660 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Nckap1P28660 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nckap1P28660 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Nckap1P28660 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nckap1P28660 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Nckap1P28660 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nckap1P28660 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nckap1P28660 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nckap1P28660 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.16■□□□□ 0.98
Nckap1P28660 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nckap1P28660 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nckap1P28660 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.16■□□□□ 0.98
Nckap1P28660 Gm9847-201ENSMUST00000052528 599 ntBASIC21.16■□□□□ 0.98
Nckap1P28660 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Nckap1P28660 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nckap1P28660 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nckap1P28660 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nckap1P28660 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nckap1P28660 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nckap1P28660 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nckap1P28660 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Nckap1P28660 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nckap1P28660 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nckap1P28660 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nckap1P28660 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nckap1P28660 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nckap1P28660 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.14■□□□□ 0.97
Nckap1P28660 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Nckap1P28660 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nckap1P28660 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Nckap1P28660 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Nckap1P28660 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nckap1P28660 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nckap1P28660 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nckap1P28660 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nckap1P28660 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Nckap1P28660 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nckap1P28660 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nckap1P28660 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.12■□□□□ 0.97
Nckap1P28660 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nckap1P28660 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Nckap1P28660 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nckap1P28660 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nckap1P28660 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nckap1P28660 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nckap1P28660 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Nckap1P28660 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.11■□□□□ 0.97
Nckap1P28660 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.11■□□□□ 0.97
Nckap1P28660 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nckap1P28660 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.11■□□□□ 0.97
Nckap1P28660 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Nckap1P28660 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nckap1P28660 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nckap1P28660 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nckap1P28660 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nckap1P28660 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nckap1P28660 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.1■□□□□ 0.97
Nckap1P28660 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.1■□□□□ 0.97
Nckap1P28660 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Nckap1P28660 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nckap1P28660 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nckap1P28660 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.09■□□□□ 0.97
Nckap1P28660 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nckap1P28660 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nckap1P28660 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nckap1P28660 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nckap1P28660 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nckap1P28660 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nckap1P28660 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nckap1P28660 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Nckap1P28660 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms