Protein–RNA interactions for Protein: P27659

Rpl3, 60S ribosomal protein L3, mousemouse

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl3P27659 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpl3P27659 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Rpl3P27659 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpl3P27659 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpl3P27659 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.23■□□□□ 0.83
Rpl3P27659 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rpl3P27659 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.23■□□□□ 0.83
Rpl3P27659 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpl3P27659 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpl3P27659 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Rpl3P27659 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Rpl3P27659 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.23■□□□□ 0.83
Rpl3P27659 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpl3P27659 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.23■□□□□ 0.83
Rpl3P27659 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.22■□□□□ 0.83
Rpl3P27659 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rpl3P27659 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Rpl3P27659 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpl3P27659 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.22■□□□□ 0.83
Rpl3P27659 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Rpl3P27659 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Rpl3P27659 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rpl3P27659 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Rpl3P27659 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpl3P27659 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpl3P27659 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.21■□□□□ 0.83
Rpl3P27659 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpl3P27659 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpl3P27659 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpl3P27659 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpl3P27659 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rpl3P27659 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.2■□□□□ 0.82
Rpl3P27659 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpl3P27659 Gm11175-201ENSMUST00000116172 543 ntBASIC20.2■□□□□ 0.82
Rpl3P27659 Gm27502-201ENSMUST00000183495 199 ntBASIC20.2■□□□□ 0.82
Rpl3P27659 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpl3P27659 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpl3P27659 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.2■□□□□ 0.82
Rpl3P27659 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.19■□□□□ 0.82
Rpl3P27659 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rpl3P27659 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpl3P27659 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rpl3P27659 Gm7332-201ENSMUST00000118351 454 ntBASIC20.19■□□□□ 0.82
Rpl3P27659 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.19■□□□□ 0.82
Rpl3P27659 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Rpl3P27659 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Rpl3P27659 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpl3P27659 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpl3P27659 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpl3P27659 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpl3P27659 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpl3P27659 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.18■□□□□ 0.82
Rpl3P27659 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpl3P27659 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rpl3P27659 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Rpl3P27659 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl3P27659 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl3P27659 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.17■□□□□ 0.82
Rpl3P27659 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Rpl3P27659 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl3P27659 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl3P27659 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.16■□□□□ 0.82
Rpl3P27659 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rpl3P27659 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rpl3P27659 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.16■□□□□ 0.82
Rpl3P27659 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rpl3P27659 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.16■□□□□ 0.82
Rpl3P27659 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rpl3P27659 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.15■□□□□ 0.82
Rpl3P27659 Mir6538-201ENSMUST00000183713 110 ntBASIC20.15■□□□□ 0.82
Rpl3P27659 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rpl3P27659 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
Rpl3P27659 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Rpl3P27659 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rpl3P27659 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
Rpl3P27659 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rpl3P27659 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rpl3P27659 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rpl3P27659 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Rpl3P27659 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rpl3P27659 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Rpl3P27659 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rpl3P27659 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rpl3P27659 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rpl3P27659 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpl3P27659 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpl3P27659 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpl3P27659 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rpl3P27659 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.12■□□□□ 0.81
Rpl3P27659 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpl3P27659 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpl3P27659 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpl3P27659 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpl3P27659 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rpl3P27659 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rpl3P27659 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.11■□□□□ 0.81
Rpl3P27659 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rpl3P27659 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rpl3P27659 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Rpl3P27659 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms