Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
BdnfP21237 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
BdnfP21237 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
BdnfP21237 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BdnfP21237 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BdnfP21237 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.32■□□□□ 0.84
BdnfP21237 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BdnfP21237 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
BdnfP21237 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BdnfP21237 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BdnfP21237 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
BdnfP21237 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BdnfP21237 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
BdnfP21237 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
BdnfP21237 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.31■□□□□ 0.84
BdnfP21237 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
BdnfP21237 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BdnfP21237 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BdnfP21237 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
BdnfP21237 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BdnfP21237 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.3■□□□□ 0.84
BdnfP21237 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
BdnfP21237 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BdnfP21237 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
BdnfP21237 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BdnfP21237 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.3■□□□□ 0.84
BdnfP21237 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
BdnfP21237 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BdnfP21237 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BdnfP21237 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
BdnfP21237 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.29■□□□□ 0.84
BdnfP21237 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BdnfP21237 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BdnfP21237 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
BdnfP21237 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
BdnfP21237 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.27■□□□□ 0.84
BdnfP21237 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
BdnfP21237 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BdnfP21237 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
BdnfP21237 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.27■□□□□ 0.84
BdnfP21237 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BdnfP21237 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
BdnfP21237 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
BdnfP21237 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.26■□□□□ 0.83
BdnfP21237 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BdnfP21237 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
BdnfP21237 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BdnfP21237 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BdnfP21237 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BdnfP21237 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BdnfP21237 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
BdnfP21237 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
BdnfP21237 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
BdnfP21237 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
BdnfP21237 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.25■□□□□ 0.83
BdnfP21237 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.24■□□□□ 0.83
BdnfP21237 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
BdnfP21237 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BdnfP21237 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
BdnfP21237 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BdnfP21237 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BdnfP21237 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BdnfP21237 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.23■□□□□ 0.83
BdnfP21237 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
BdnfP21237 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.23■□□□□ 0.83
BdnfP21237 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BdnfP21237 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BdnfP21237 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
BdnfP21237 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BdnfP21237 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BdnfP21237 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.23■□□□□ 0.83
BdnfP21237 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BdnfP21237 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BdnfP21237 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
BdnfP21237 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BdnfP21237 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BdnfP21237 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BdnfP21237 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BdnfP21237 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
BdnfP21237 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BdnfP21237 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.22■□□□□ 0.83
BdnfP21237 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
BdnfP21237 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BdnfP21237 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
BdnfP21237 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
BdnfP21237 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BdnfP21237 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BdnfP21237 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.21■□□□□ 0.83
BdnfP21237 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BdnfP21237 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.2■□□□□ 0.82
BdnfP21237 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BdnfP21237 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
BdnfP21237 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BdnfP21237 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BdnfP21237 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BdnfP21237 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BdnfP21237 Notumos-201ENSMUST00000151998 2659 ntBASIC20.19■□□□□ 0.82
BdnfP21237 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
BdnfP21237 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BdnfP21237 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms