Protein–RNA interactions for Protein: P15388

Kcnc1, Potassium voltage-gated channel subfamily C member 1, mousemouse

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnc1P15388 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Kcnc1P15388 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Kcnc1P15388 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Kcnc1P15388 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Kcnc1P15388 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Kcnc1P15388 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Kcnc1P15388 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Kcnc1P15388 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Kcnc1P15388 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Kcnc1P15388 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Kcnc1P15388 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Kcnc1P15388 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Kcnc1P15388 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Kcnc1P15388 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.88■□□□□ 0.93
Kcnc1P15388 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Kcnc1P15388 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Kcnc1P15388 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.87■□□□□ 0.93
Kcnc1P15388 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.87■□□□□ 0.93
Kcnc1P15388 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Kcnc1P15388 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Kcnc1P15388 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Kcnc1P15388 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Kcnc1P15388 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Kcnc1P15388 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.86■□□□□ 0.93
Kcnc1P15388 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Kcnc1P15388 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Kcnc1P15388 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Kcnc1P15388 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Kcnc1P15388 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Kcnc1P15388 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Kcnc1P15388 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Kcnc1P15388 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Kcnc1P15388 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Kcnc1P15388 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Kcnc1P15388 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Kcnc1P15388 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Kcnc1P15388 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Kcnc1P15388 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.83■□□□□ 0.93
Kcnc1P15388 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Kcnc1P15388 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Kcnc1P15388 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Kcnc1P15388 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Kcnc1P15388 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Kcnc1P15388 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Kcnc1P15388 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.82■□□□□ 0.92
Kcnc1P15388 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.82■□□□□ 0.92
Kcnc1P15388 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Kcnc1P15388 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Kcnc1P15388 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Kcnc1P15388 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Kcnc1P15388 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.81■□□□□ 0.92
Kcnc1P15388 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Kcnc1P15388 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Kcnc1P15388 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.81■□□□□ 0.92
Kcnc1P15388 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Kcnc1P15388 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Kcnc1P15388 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Kcnc1P15388 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Kcnc1P15388 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.8■□□□□ 0.92
Kcnc1P15388 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Kcnc1P15388 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Kcnc1P15388 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Kcnc1P15388 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Kcnc1P15388 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Kcnc1P15388 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Kcnc1P15388 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Kcnc1P15388 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.79■□□□□ 0.92
Kcnc1P15388 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.79■□□□□ 0.92
Kcnc1P15388 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.79■□□□□ 0.92
Kcnc1P15388 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Kcnc1P15388 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Kcnc1P15388 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.78■□□□□ 0.92
Kcnc1P15388 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Kcnc1P15388 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Kcnc1P15388 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Kcnc1P15388 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Kcnc1P15388 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Kcnc1P15388 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.78■□□□□ 0.92
Kcnc1P15388 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Kcnc1P15388 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Kcnc1P15388 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Kcnc1P15388 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Kcnc1P15388 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.77■□□□□ 0.92
Kcnc1P15388 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Kcnc1P15388 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Kcnc1P15388 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Kcnc1P15388 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Kcnc1P15388 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Kcnc1P15388 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.76■□□□□ 0.91
Kcnc1P15388 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Kcnc1P15388 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Kcnc1P15388 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Kcnc1P15388 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Kcnc1P15388 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.75■□□□□ 0.91
Kcnc1P15388 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Kcnc1P15388 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Kcnc1P15388 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Kcnc1P15388 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.75■□□□□ 0.91
Kcnc1P15388 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Kcnc1P15388 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms