Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
P04224 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
P04224 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
P04224 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
P04224 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
P04224 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
P04224 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
P04224 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
P04224 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
P04224 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
P04224 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.52■□□□□ 0.56
P04224 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
P04224 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
P04224 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
P04224 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
P04224 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
P04224 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.51■□□□□ 0.55
P04224 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
P04224 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
P04224 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
P04224 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
P04224 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
P04224 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.51■□□□□ 0.55
P04224 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.5■□□□□ 0.55
P04224 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.5■□□□□ 0.55
P04224 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
P04224 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
P04224 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
P04224 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
P04224 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
P04224 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
P04224 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
P04224 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P04224 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
P04224 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P04224 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P04224 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
P04224 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
P04224 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
P04224 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
P04224 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
P04224 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
P04224 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P04224 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P04224 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
P04224 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.47■□□□□ 0.55
P04224 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
P04224 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
P04224 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
P04224 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.47■□□□□ 0.55
P04224 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
P04224 Gm4799-201ENSMUST00000095396 657 ntBASIC18.47■□□□□ 0.55
P04224 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
P04224 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
P04224 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
P04224 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P04224 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
P04224 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P04224 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P04224 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.46■□□□□ 0.55
P04224 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
P04224 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P04224 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P04224 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
P04224 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
P04224 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
P04224 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P04224 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P04224 Gm8503-201ENSMUST00000118131 455 ntBASIC18.45■□□□□ 0.54
P04224 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.45■□□□□ 0.54
P04224 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
P04224 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.45■□□□□ 0.54
P04224 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P04224 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P04224 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.45■□□□□ 0.54
P04224 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P04224 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
P04224 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
P04224 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.44■□□□□ 0.54
P04224 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.44■□□□□ 0.54
P04224 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
P04224 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
P04224 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.44■□□□□ 0.54
P04224 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
P04224 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
P04224 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
P04224 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
P04224 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
P04224 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
P04224 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
P04224 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
P04224 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
P04224 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
P04224 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
P04224 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.42■□□□□ 0.54
P04224 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
P04224 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.42■□□□□ 0.54
P04224 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.42■□□□□ 0.54
P04224 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
P04224 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms