Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
P01852 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.44■□□□□ 0.7
P01852 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.44■□□□□ 0.7
P01852 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
P01852 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P01852 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P01852 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P01852 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P01852 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P01852 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
P01852 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.43■□□□□ 0.7
P01852 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
P01852 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.43■□□□□ 0.7
P01852 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P01852 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P01852 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P01852 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P01852 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P01852 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
P01852 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.42■□□□□ 0.7
P01852 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
P01852 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.42■□□□□ 0.7
P01852 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.42■□□□□ 0.7
P01852 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
P01852 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
P01852 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P01852 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
P01852 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
P01852 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P01852 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
P01852 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
P01852 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
P01852 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
P01852 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
P01852 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.4■□□□□ 0.7
P01852 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P01852 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
P01852 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P01852 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P01852 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P01852 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
P01852 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
P01852 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
P01852 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P01852 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
P01852 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
P01852 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P01852 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P01852 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P01852 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
P01852 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P01852 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P01852 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
P01852 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
P01852 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
P01852 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P01852 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
P01852 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P01852 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P01852 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
P01852 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P01852 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
P01852 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.37■□□□□ 0.69
P01852 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.37■□□□□ 0.69
P01852 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.37■□□□□ 0.69
P01852 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P01852 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
P01852 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
P01852 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01852 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.36■□□□□ 0.69
P01852 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01852 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01852 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
P01852 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01852 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01852 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
P01852 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
P01852 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.36■□□□□ 0.69
P01852 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01852 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.36■□□□□ 0.69
P01852 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
P01852 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01852 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01852 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01852 Gm15546-201ENSMUST00000122095 826 ntBASIC19.35■□□□□ 0.69
P01852 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.35■□□□□ 0.69
P01852 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01852 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01852 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
P01852 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
P01852 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P01852 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
P01852 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P01852 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P01852 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P01852 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.34■□□□□ 0.69
P01852 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
P01852 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
P01852 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
P01852 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 145.8 ms