Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ifna1P01572 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ifna1P01572 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ifna1P01572 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ifna1P01572 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ifna1P01572 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ifna1P01572 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ifna1P01572 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.92■□□□□ 0.46
Ifna1P01572 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ifna1P01572 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ifna1P01572 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ifna1P01572 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ifna1P01572 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ifna1P01572 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ifna1P01572 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ifna1P01572 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ifna1P01572 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ifna1P01572 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
Ifna1P01572 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ifna1P01572 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ifna1P01572 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.9■□□□□ 0.46
Ifna1P01572 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ifna1P01572 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.9■□□□□ 0.46
Ifna1P01572 Gm7432-201ENSMUST00000210343 879 ntBASIC17.9■□□□□ 0.46
Ifna1P01572 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ifna1P01572 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.9■□□□□ 0.46
Ifna1P01572 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ifna1P01572 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ifna1P01572 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ifna1P01572 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Ifna1P01572 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ifna1P01572 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.89■□□□□ 0.45
Ifna1P01572 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ifna1P01572 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ifna1P01572 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.89■□□□□ 0.45
Ifna1P01572 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ifna1P01572 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ifna1P01572 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.88■□□□□ 0.45
Ifna1P01572 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ifna1P01572 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ifna1P01572 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ifna1P01572 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ifna1P01572 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ifna1P01572 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ifna1P01572 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ifna1P01572 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ifna1P01572 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.87■□□□□ 0.45
Ifna1P01572 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ifna1P01572 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.87■□□□□ 0.45
Ifna1P01572 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ifna1P01572 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
Ifna1P01572 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ifna1P01572 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Ifna1P01572 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ifna1P01572 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ifna1P01572 Gm11599-201ENSMUST00000118720 878 ntBASIC17.86■□□□□ 0.45
Ifna1P01572 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.86■□□□□ 0.45
Ifna1P01572 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ifna1P01572 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ifna1P01572 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Ifna1P01572 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Ifna1P01572 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Ifna1P01572 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ifna1P01572 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ifna1P01572 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ifna1P01572 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ifna1P01572 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ifna1P01572 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ifna1P01572 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ifna1P01572 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ifna1P01572 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ifna1P01572 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ifna1P01572 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ifna1P01572 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ifna1P01572 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ifna1P01572 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ifna1P01572 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ifna1P01572 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ifna1P01572 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ifna1P01572 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.82■□□□□ 0.44
Ifna1P01572 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ifna1P01572 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ifna1P01572 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ifna1P01572 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ifna1P01572 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ifna1P01572 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.81■□□□□ 0.44
Ifna1P01572 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ifna1P01572 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ifna1P01572 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ifna1P01572 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Ifna1P01572 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ifna1P01572 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ifna1P01572 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ifna1P01572 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ifna1P01572 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ifna1P01572 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ifna1P01572 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ifna1P01572 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.8■□□□□ 0.44
Ifna1P01572 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ifna1P01572 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms