Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Slc6a20bO88575 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Slc6a20bO88575 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Slc6a20bO88575 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC23.64■■□□□ 1.37
Slc6a20bO88575 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC23.64■■□□□ 1.37
Slc6a20bO88575 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
Slc6a20bO88575 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Slc6a20bO88575 Gm28731-201ENSMUST00000185564 1569 ntBASIC23.64■■□□□ 1.37
Slc6a20bO88575 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Slc6a20bO88575 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Slc6a20bO88575 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Slc6a20bO88575 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC23.63■■□□□ 1.37
Slc6a20bO88575 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC23.63■■□□□ 1.37
Slc6a20bO88575 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC23.63■■□□□ 1.37
Slc6a20bO88575 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC23.63■■□□□ 1.37
Slc6a20bO88575 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Slc6a20bO88575 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Slc6a20bO88575 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC23.63■■□□□ 1.37
Slc6a20bO88575 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Slc6a20bO88575 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Slc6a20bO88575 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Slc6a20bO88575 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC23.62■■□□□ 1.37
Slc6a20bO88575 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Slc6a20bO88575 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC23.62■■□□□ 1.37
Slc6a20bO88575 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Slc6a20bO88575 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Slc6a20bO88575 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Slc6a20bO88575 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Slc6a20bO88575 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Slc6a20bO88575 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Slc6a20bO88575 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
Slc6a20bO88575 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Slc6a20bO88575 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Slc6a20bO88575 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Slc6a20bO88575 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Slc6a20bO88575 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Slc6a20bO88575 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC23.59■■□□□ 1.37
Slc6a20bO88575 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
Slc6a20bO88575 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Slc6a20bO88575 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Slc6a20bO88575 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Slc6a20bO88575 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Slc6a20bO88575 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Slc6a20bO88575 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Slc6a20bO88575 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Slc6a20bO88575 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC23.58■■□□□ 1.37
Slc6a20bO88575 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Slc6a20bO88575 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Slc6a20bO88575 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Slc6a20bO88575 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Slc6a20bO88575 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Slc6a20bO88575 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Slc6a20bO88575 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
Slc6a20bO88575 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Slc6a20bO88575 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Slc6a20bO88575 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Slc6a20bO88575 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC23.56■■□□□ 1.36
Slc6a20bO88575 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Slc6a20bO88575 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Slc6a20bO88575 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Slc6a20bO88575 AC164629.5-201ENSMUST00000220387 632 ntBASIC23.55■■□□□ 1.36
Slc6a20bO88575 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC23.55■■□□□ 1.36
Slc6a20bO88575 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Slc6a20bO88575 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.54■■□□□ 1.36
Slc6a20bO88575 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC23.54■■□□□ 1.36
Slc6a20bO88575 Gm21168-201ENSMUST00000199646 1096 ntBASIC23.54■■□□□ 1.36
Slc6a20bO88575 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Slc6a20bO88575 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Slc6a20bO88575 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Slc6a20bO88575 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
Slc6a20bO88575 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Slc6a20bO88575 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Slc6a20bO88575 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Slc6a20bO88575 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Slc6a20bO88575 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Slc6a20bO88575 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Slc6a20bO88575 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Slc6a20bO88575 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Slc6a20bO88575 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.52■■□□□ 1.36
Slc6a20bO88575 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC23.52■■□□□ 1.36
Slc6a20bO88575 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Slc6a20bO88575 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Slc6a20bO88575 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC23.51■■□□□ 1.35
Slc6a20bO88575 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
Slc6a20bO88575 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Slc6a20bO88575 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Slc6a20bO88575 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC23.5■■□□□ 1.35
Slc6a20bO88575 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC23.5■■□□□ 1.35
Slc6a20bO88575 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.5■■□□□ 1.35
Slc6a20bO88575 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Slc6a20bO88575 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Slc6a20bO88575 Gm43137-201ENSMUST00000198052 594 ntBASIC23.49■■□□□ 1.35
Slc6a20bO88575 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.49■■□□□ 1.35
Slc6a20bO88575 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
Slc6a20bO88575 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Slc6a20bO88575 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Slc6a20bO88575 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Slc6a20bO88575 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Slc6a20bO88575 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Slc6a20bO88575 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms