Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.57■□□□□ 0.72
Cops4O88544 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cops4O88544 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cops4O88544 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cops4O88544 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Cops4O88544 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cops4O88544 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cops4O88544 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cops4O88544 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cops4O88544 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cops4O88544 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.55■□□□□ 0.72
Cops4O88544 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cops4O88544 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.55■□□□□ 0.72
Cops4O88544 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.55■□□□□ 0.72
Cops4O88544 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
Cops4O88544 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.55■□□□□ 0.72
Cops4O88544 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cops4O88544 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cops4O88544 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cops4O88544 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cops4O88544 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cops4O88544 Gm45364-201ENSMUST00000210883 159 ntBASIC19.54■□□□□ 0.72
Cops4O88544 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cops4O88544 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cops4O88544 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.54■□□□□ 0.72
Cops4O88544 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.53■□□□□ 0.72
Cops4O88544 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.53■□□□□ 0.72
Cops4O88544 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cops4O88544 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.53■□□□□ 0.72
Cops4O88544 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Cops4O88544 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cops4O88544 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.53■□□□□ 0.72
Cops4O88544 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cops4O88544 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.53■□□□□ 0.72
Cops4O88544 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cops4O88544 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.53■□□□□ 0.72
Cops4O88544 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cops4O88544 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cops4O88544 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
Cops4O88544 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cops4O88544 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Cops4O88544 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cops4O88544 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Cops4O88544 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cops4O88544 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cops4O88544 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Cops4O88544 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cops4O88544 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Cops4O88544 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Cops4O88544 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.51■□□□□ 0.71
Cops4O88544 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cops4O88544 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cops4O88544 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cops4O88544 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cops4O88544 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cops4O88544 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cops4O88544 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.51■□□□□ 0.71
Cops4O88544 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cops4O88544 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cops4O88544 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cops4O88544 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cops4O88544 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cops4O88544 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Cops4O88544 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cops4O88544 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cops4O88544 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cops4O88544 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cops4O88544 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cops4O88544 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cops4O88544 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.49■□□□□ 0.71
Cops4O88544 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cops4O88544 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cops4O88544 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cops4O88544 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cops4O88544 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.48■□□□□ 0.71
Cops4O88544 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cops4O88544 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.48■□□□□ 0.71
Cops4O88544 Terc-201ENSMUST00000082862 423 ntBASIC19.48■□□□□ 0.71
Cops4O88544 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cops4O88544 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.48■□□□□ 0.71
Cops4O88544 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cops4O88544 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cops4O88544 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Cops4O88544 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cops4O88544 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cops4O88544 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.47■□□□□ 0.71
Cops4O88544 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Cops4O88544 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cops4O88544 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Cops4O88544 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.46■□□□□ 0.71
Cops4O88544 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Cops4O88544 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cops4O88544 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cops4O88544 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cops4O88544 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Cops4O88544 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cops4O88544 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cops4O88544 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cops4O88544 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cops4O88544 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms