Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pdlim3O70209 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pdlim3O70209 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.3■□□□□ 0.68
Pdlim3O70209 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdlim3O70209 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdlim3O70209 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdlim3O70209 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdlim3O70209 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdlim3O70209 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdlim3O70209 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pdlim3O70209 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdlim3O70209 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdlim3O70209 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdlim3O70209 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdlim3O70209 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Pdlim3O70209 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
Pdlim3O70209 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.28■□□□□ 0.68
Pdlim3O70209 Gm44428-201ENSMUST00000204474 874 ntBASIC19.28■□□□□ 0.68
Pdlim3O70209 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pdlim3O70209 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdlim3O70209 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdlim3O70209 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdlim3O70209 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdlim3O70209 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Pdlim3O70209 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pdlim3O70209 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pdlim3O70209 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdlim3O70209 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdlim3O70209 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdlim3O70209 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdlim3O70209 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pdlim3O70209 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdlim3O70209 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Pdlim3O70209 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdlim3O70209 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdlim3O70209 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdlim3O70209 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdlim3O70209 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdlim3O70209 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdlim3O70209 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pdlim3O70209 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.25■□□□□ 0.67
Pdlim3O70209 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdlim3O70209 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdlim3O70209 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdlim3O70209 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdlim3O70209 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.24■□□□□ 0.67
Pdlim3O70209 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdlim3O70209 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdlim3O70209 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdlim3O70209 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.23■□□□□ 0.67
Pdlim3O70209 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pdlim3O70209 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pdlim3O70209 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pdlim3O70209 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
Pdlim3O70209 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdlim3O70209 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.22■□□□□ 0.67
Pdlim3O70209 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdlim3O70209 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.22■□□□□ 0.67
Pdlim3O70209 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdlim3O70209 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdlim3O70209 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pdlim3O70209 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pdlim3O70209 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.21■□□□□ 0.67
Pdlim3O70209 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.21■□□□□ 0.67
Pdlim3O70209 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pdlim3O70209 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Pdlim3O70209 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pdlim3O70209 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdlim3O70209 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdlim3O70209 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdlim3O70209 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
Pdlim3O70209 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdlim3O70209 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdlim3O70209 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdlim3O70209 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdlim3O70209 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Pdlim3O70209 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim3O70209 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim3O70209 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim3O70209 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim3O70209 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim3O70209 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.19■□□□□ 0.66
Pdlim3O70209 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pdlim3O70209 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdlim3O70209 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.18■□□□□ 0.66
Pdlim3O70209 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
Pdlim3O70209 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdlim3O70209 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdlim3O70209 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pdlim3O70209 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdlim3O70209 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.18■□□□□ 0.66
Pdlim3O70209 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdlim3O70209 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Pdlim3O70209 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Pdlim3O70209 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Pdlim3O70209 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdlim3O70209 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pdlim3O70209 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdlim3O70209 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Pdlim3O70209 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms