Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rdh5O55240 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rdh5O55240 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Rdh5O55240 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Rdh5O55240 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Rdh5O55240 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rdh5O55240 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Rdh5O55240 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rdh5O55240 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rdh5O55240 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rdh5O55240 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.17■□□□□ 0.82
Rdh5O55240 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.17■□□□□ 0.82
Rdh5O55240 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rdh5O55240 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rdh5O55240 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rdh5O55240 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rdh5O55240 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Rdh5O55240 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rdh5O55240 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rdh5O55240 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
Rdh5O55240 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rdh5O55240 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rdh5O55240 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rdh5O55240 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Rdh5O55240 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rdh5O55240 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.15■□□□□ 0.82
Rdh5O55240 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rdh5O55240 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Rdh5O55240 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.15■□□□□ 0.82
Rdh5O55240 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Rdh5O55240 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Rdh5O55240 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rdh5O55240 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rdh5O55240 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rdh5O55240 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Rdh5O55240 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rdh5O55240 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.14■□□□□ 0.81
Rdh5O55240 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.14■□□□□ 0.81
Rdh5O55240 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rdh5O55240 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rdh5O55240 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Rdh5O55240 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rdh5O55240 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rdh5O55240 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rdh5O55240 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.13■□□□□ 0.81
Rdh5O55240 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Rdh5O55240 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rdh5O55240 Gm5921-201ENSMUST00000075898 882 ntBASIC20.13■□□□□ 0.81
Rdh5O55240 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rdh5O55240 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Rdh5O55240 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rdh5O55240 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rdh5O55240 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rdh5O55240 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Rdh5O55240 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rdh5O55240 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
Rdh5O55240 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rdh5O55240 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Rdh5O55240 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.11■□□□□ 0.81
Rdh5O55240 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Rdh5O55240 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rdh5O55240 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Rdh5O55240 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rdh5O55240 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rdh5O55240 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.1■□□□□ 0.81
Rdh5O55240 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.09■□□□□ 0.81
Rdh5O55240 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rdh5O55240 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rdh5O55240 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.09■□□□□ 0.81
Rdh5O55240 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Rdh5O55240 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rdh5O55240 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rdh5O55240 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
Rdh5O55240 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rdh5O55240 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rdh5O55240 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rdh5O55240 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Rdh5O55240 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rdh5O55240 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rdh5O55240 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Rdh5O55240 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rdh5O55240 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rdh5O55240 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rdh5O55240 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Rdh5O55240 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rdh5O55240 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rdh5O55240 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rdh5O55240 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rdh5O55240 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rdh5O55240 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rdh5O55240 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rdh5O55240 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rdh5O55240 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rdh5O55240 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rdh5O55240 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rdh5O55240 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Rdh5O55240 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rdh5O55240 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rdh5O55240 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rdh5O55240 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms