Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Trdmt1O55055 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
Trdmt1O55055 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trdmt1O55055 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trdmt1O55055 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trdmt1O55055 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC23.84■■□□□ 1.41
Trdmt1O55055 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trdmt1O55055 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trdmt1O55055 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Trdmt1O55055 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC23.83■■□□□ 1.41
Trdmt1O55055 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Trdmt1O55055 Golgb1-201ENSMUST00000023534 498 ntBASIC23.83■■□□□ 1.41
Trdmt1O55055 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Trdmt1O55055 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.83■■□□□ 1.4
Trdmt1O55055 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC23.82■■□□□ 1.4
Trdmt1O55055 Gm12821-201ENSMUST00000120022 600 ntBASIC23.82■■□□□ 1.4
Trdmt1O55055 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC23.82■■□□□ 1.4
Trdmt1O55055 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trdmt1O55055 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trdmt1O55055 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC23.82■■□□□ 1.4
Trdmt1O55055 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trdmt1O55055 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trdmt1O55055 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trdmt1O55055 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC23.81■■□□□ 1.4
Trdmt1O55055 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trdmt1O55055 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Trdmt1O55055 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC23.8■■□□□ 1.4
Trdmt1O55055 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Trdmt1O55055 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trdmt1O55055 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trdmt1O55055 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trdmt1O55055 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC23.79■■□□□ 1.4
Trdmt1O55055 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
Trdmt1O55055 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trdmt1O55055 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trdmt1O55055 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trdmt1O55055 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trdmt1O55055 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Trdmt1O55055 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Trdmt1O55055 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trdmt1O55055 Gm27454-201ENSMUST00000185090 204 ntBASIC23.78■■□□□ 1.4
Trdmt1O55055 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Trdmt1O55055 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Trdmt1O55055 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trdmt1O55055 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
Trdmt1O55055 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trdmt1O55055 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trdmt1O55055 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC23.76■■□□□ 1.39
Trdmt1O55055 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trdmt1O55055 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Trdmt1O55055 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trdmt1O55055 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trdmt1O55055 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Trdmt1O55055 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trdmt1O55055 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Trdmt1O55055 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trdmt1O55055 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trdmt1O55055 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Trdmt1O55055 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trdmt1O55055 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trdmt1O55055 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trdmt1O55055 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Trdmt1O55055 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC23.74■■□□□ 1.39
Trdmt1O55055 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Trdmt1O55055 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC23.73■■□□□ 1.39
Trdmt1O55055 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trdmt1O55055 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Trdmt1O55055 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trdmt1O55055 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Trdmt1O55055 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Trdmt1O55055 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Trdmt1O55055 Gm45417-201ENSMUST00000209533 758 ntBASIC23.72■■□□□ 1.39
Trdmt1O55055 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC23.72■■□□□ 1.39
Trdmt1O55055 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Trdmt1O55055 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trdmt1O55055 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trdmt1O55055 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC23.71■■□□□ 1.39
Trdmt1O55055 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trdmt1O55055 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Trdmt1O55055 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
Trdmt1O55055 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Trdmt1O55055 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trdmt1O55055 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC23.7■■□□□ 1.38
Trdmt1O55055 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trdmt1O55055 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC23.69■■□□□ 1.38
Trdmt1O55055 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
Trdmt1O55055 Serp2-204ENSMUST00000228055 705 ntBASIC23.69■■□□□ 1.38
Trdmt1O55055 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trdmt1O55055 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trdmt1O55055 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Trdmt1O55055 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trdmt1O55055 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC23.68■■□□□ 1.38
Trdmt1O55055 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC23.68■■□□□ 1.38
Trdmt1O55055 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Trdmt1O55055 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trdmt1O55055 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trdmt1O55055 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC23.67■■□□□ 1.38
Trdmt1O55055 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trdmt1O55055 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trdmt1O55055 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms