Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cx3cl1O35188 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Cx3cl1O35188 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.95■□□□□ 0.78
Cx3cl1O35188 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cx3cl1O35188 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cx3cl1O35188 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cx3cl1O35188 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cx3cl1O35188 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cx3cl1O35188 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cx3cl1O35188 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Cx3cl1O35188 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cx3cl1O35188 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cx3cl1O35188 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cx3cl1O35188 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.94■□□□□ 0.78
Cx3cl1O35188 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.94■□□□□ 0.78
Cx3cl1O35188 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cx3cl1O35188 Gm5812-201ENSMUST00000061073 957 ntBASIC19.94■□□□□ 0.78
Cx3cl1O35188 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cx3cl1O35188 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cx3cl1O35188 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.94■□□□□ 0.78
Cx3cl1O35188 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cx3cl1O35188 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cx3cl1O35188 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cx3cl1O35188 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cx3cl1O35188 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cx3cl1O35188 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cx3cl1O35188 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cx3cl1O35188 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cx3cl1O35188 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cx3cl1O35188 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cx3cl1O35188 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
Cx3cl1O35188 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cx3cl1O35188 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Cx3cl1O35188 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cx3cl1O35188 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Cx3cl1O35188 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cx3cl1O35188 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cx3cl1O35188 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Cx3cl1O35188 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.91■□□□□ 0.78
Cx3cl1O35188 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cx3cl1O35188 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cx3cl1O35188 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cx3cl1O35188 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cx3cl1O35188 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cx3cl1O35188 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cx3cl1O35188 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Cx3cl1O35188 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cx3cl1O35188 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cx3cl1O35188 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.9■□□□□ 0.78
Cx3cl1O35188 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cx3cl1O35188 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.9■□□□□ 0.78
Cx3cl1O35188 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Cx3cl1O35188 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.9■□□□□ 0.78
Cx3cl1O35188 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cx3cl1O35188 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Cx3cl1O35188 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cx3cl1O35188 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cx3cl1O35188 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cx3cl1O35188 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cx3cl1O35188 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cx3cl1O35188 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Cx3cl1O35188 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cx3cl1O35188 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cx3cl1O35188 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cx3cl1O35188 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cx3cl1O35188 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.88■□□□□ 0.77
Cx3cl1O35188 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.88■□□□□ 0.77
Cx3cl1O35188 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cx3cl1O35188 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Cx3cl1O35188 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cx3cl1O35188 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.88■□□□□ 0.77
Cx3cl1O35188 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cx3cl1O35188 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cx3cl1O35188 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Cx3cl1O35188 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cx3cl1O35188 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Cx3cl1O35188 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.87■□□□□ 0.77
Cx3cl1O35188 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Cx3cl1O35188 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cx3cl1O35188 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.87■□□□□ 0.77
Cx3cl1O35188 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cx3cl1O35188 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cx3cl1O35188 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cx3cl1O35188 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cx3cl1O35188 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cx3cl1O35188 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
Cx3cl1O35188 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cx3cl1O35188 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cx3cl1O35188 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cx3cl1O35188 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cx3cl1O35188 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cx3cl1O35188 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cx3cl1O35188 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Cx3cl1O35188 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cx3cl1O35188 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.85■□□□□ 0.77
Cx3cl1O35188 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cx3cl1O35188 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Cx3cl1O35188 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.84■□□□□ 0.77
Cx3cl1O35188 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.84■□□□□ 0.77
Cx3cl1O35188 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms