Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufb11O09111 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufb11O09111 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufb11O09111 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufb11O09111 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufb11O09111 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufb11O09111 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufb11O09111 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufb11O09111 Gm22567-201ENSMUST00000175542 342 ntBASIC17.13■□□□□ 0.33
Ndufb11O09111 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Ndufb11O09111 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufb11O09111 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ndufb11O09111 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ndufb11O09111 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ndufb11O09111 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ndufb11O09111 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ndufb11O09111 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ndufb11O09111 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Ndufb11O09111 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndufb11O09111 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndufb11O09111 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ndufb11O09111 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Ndufb11O09111 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufb11O09111 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufb11O09111 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufb11O09111 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndufb11O09111 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndufb11O09111 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ndufb11O09111 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ndufb11O09111 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ndufb11O09111 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ndufb11O09111 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ndufb11O09111 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.08■□□□□ 0.32
Ndufb11O09111 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ndufb11O09111 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.08■□□□□ 0.32
Ndufb11O09111 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ndufb11O09111 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ndufb11O09111 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ndufb11O09111 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ndufb11O09111 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ndufb11O09111 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ndufb11O09111 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ndufb11O09111 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ndufb11O09111 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ndufb11O09111 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ndufb11O09111 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ndufb11O09111 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ndufb11O09111 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ndufb11O09111 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ndufb11O09111 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ndufb11O09111 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ndufb11O09111 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC17.06■□□□□ 0.32
Ndufb11O09111 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ndufb11O09111 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ndufb11O09111 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ndufb11O09111 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ndufb11O09111 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ndufb11O09111 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ndufb11O09111 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ndufb11O09111 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ndufb11O09111 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ndufb11O09111 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ndufb11O09111 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ndufb11O09111 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ndufb11O09111 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ndufb11O09111 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ndufb11O09111 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ndufb11O09111 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ndufb11O09111 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ndufb11O09111 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ndufb11O09111 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ndufb11O09111 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.03■□□□□ 0.32
Ndufb11O09111 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ndufb11O09111 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ndufb11O09111 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ndufb11O09111 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Ndufb11O09111 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ndufb11O09111 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ndufb11O09111 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.03■□□□□ 0.32
Ndufb11O09111 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ndufb11O09111 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Ndufb11O09111 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ndufb11O09111 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ndufb11O09111 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ndufb11O09111 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Ndufb11O09111 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ndufb11O09111 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ndufb11O09111 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Ndufb11O09111 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ndufb11O09111 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ndufb11O09111 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ndufb11O09111 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ndufb11O09111 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ndufb11O09111 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ndufb11O09111 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ndufb11O09111 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ndufb11O09111 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ndufb11O09111 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ndufb11O09111 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ndufb11O09111 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms