Protein–RNA interactions for Protein: O08792

Ebf2, Transcription factor COE2, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf2O08792 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Ebf2O08792 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ebf2O08792 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ebf2O08792 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.82■■□□□ 1.08
Ebf2O08792 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ebf2O08792 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.82■■□□□ 1.08
Ebf2O08792 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ebf2O08792 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.82■■□□□ 1.08
Ebf2O08792 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.82■■□□□ 1.08
Ebf2O08792 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ebf2O08792 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Ebf2O08792 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ebf2O08792 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ebf2O08792 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ebf2O08792 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ebf2O08792 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ebf2O08792 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ebf2O08792 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ebf2O08792 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Ebf2O08792 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Ebf2O08792 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ebf2O08792 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ebf2O08792 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ebf2O08792 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ebf2O08792 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ebf2O08792 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ebf2O08792 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ebf2O08792 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ebf2O08792 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Ebf2O08792 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ebf2O08792 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ebf2O08792 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Ebf2O08792 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ebf2O08792 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ebf2O08792 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.78■■□□□ 1.08
Ebf2O08792 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ebf2O08792 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ebf2O08792 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ebf2O08792 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ebf2O08792 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ebf2O08792 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ebf2O08792 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.77■■□□□ 1.08
Ebf2O08792 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ebf2O08792 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ebf2O08792 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ebf2O08792 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Ebf2O08792 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ebf2O08792 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ebf2O08792 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.76■■□□□ 1.07
Ebf2O08792 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ebf2O08792 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ebf2O08792 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ebf2O08792 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ebf2O08792 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.75■■□□□ 1.07
Ebf2O08792 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Ebf2O08792 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ebf2O08792 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ebf2O08792 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ebf2O08792 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.74■■□□□ 1.07
Ebf2O08792 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ebf2O08792 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ebf2O08792 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ebf2O08792 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Ebf2O08792 Rps24-207ENSMUST00000224568 714 ntBASIC21.73■■□□□ 1.07
Ebf2O08792 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ebf2O08792 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ebf2O08792 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ebf2O08792 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ebf2O08792 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ebf2O08792 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ebf2O08792 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ebf2O08792 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ebf2O08792 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ebf2O08792 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.72■■□□□ 1.07
Ebf2O08792 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ebf2O08792 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ebf2O08792 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ebf2O08792 Gm45102-201ENSMUST00000207427 857 ntBASIC21.71■■□□□ 1.07
Ebf2O08792 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Ebf2O08792 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Ebf2O08792 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ebf2O08792 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Ebf2O08792 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ebf2O08792 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ebf2O08792 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ebf2O08792 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ebf2O08792 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ebf2O08792 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Ebf2O08792 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.69■■□□□ 1.06
Ebf2O08792 Gm14117-201ENSMUST00000122417 843 ntBASIC21.69■■□□□ 1.06
Ebf2O08792 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.69■■□□□ 1.06
Ebf2O08792 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ebf2O08792 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ebf2O08792 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ebf2O08792 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ebf2O08792 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Ebf2O08792 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ebf2O08792 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ebf2O08792 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ebf2O08792 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms