Protein–RNA interactions for Protein: H3BJZ2

Cdhr4, Cadherin-related family member 4, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr4H3BJZ2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cdhr4H3BJZ2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cdhr4H3BJZ2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdhr4H3BJZ2 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cdhr4H3BJZ2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cdhr4H3BJZ2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.8■□□□□ 0.6
Cdhr4H3BJZ2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Cdhr4H3BJZ2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdhr4H3BJZ2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdhr4H3BJZ2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdhr4H3BJZ2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.79■□□□□ 0.6
Cdhr4H3BJZ2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdhr4H3BJZ2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdhr4H3BJZ2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdhr4H3BJZ2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdhr4H3BJZ2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdhr4H3BJZ2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cdhr4H3BJZ2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cdhr4H3BJZ2 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.78■□□□□ 0.6
Cdhr4H3BJZ2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.78■□□□□ 0.6
Cdhr4H3BJZ2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cdhr4H3BJZ2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdhr4H3BJZ2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdhr4H3BJZ2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdhr4H3BJZ2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdhr4H3BJZ2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdhr4H3BJZ2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdhr4H3BJZ2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cdhr4H3BJZ2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdhr4H3BJZ2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cdhr4H3BJZ2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.77■□□□□ 0.6
Cdhr4H3BJZ2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.77■□□□□ 0.6
Cdhr4H3BJZ2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdhr4H3BJZ2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cdhr4H3BJZ2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdhr4H3BJZ2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cdhr4H3BJZ2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cdhr4H3BJZ2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cdhr4H3BJZ2 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdhr4H3BJZ2 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.76■□□□□ 0.59
Cdhr4H3BJZ2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdhr4H3BJZ2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdhr4H3BJZ2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cdhr4H3BJZ2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdhr4H3BJZ2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cdhr4H3BJZ2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.75■□□□□ 0.59
Cdhr4H3BJZ2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cdhr4H3BJZ2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Cdhr4H3BJZ2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cdhr4H3BJZ2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdhr4H3BJZ2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Cdhr4H3BJZ2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdhr4H3BJZ2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.74■□□□□ 0.59
Cdhr4H3BJZ2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.74■□□□□ 0.59
Cdhr4H3BJZ2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.74■□□□□ 0.59
Cdhr4H3BJZ2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Cdhr4H3BJZ2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdhr4H3BJZ2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cdhr4H3BJZ2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdhr4H3BJZ2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdhr4H3BJZ2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Cdhr4H3BJZ2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdhr4H3BJZ2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdhr4H3BJZ2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdhr4H3BJZ2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdhr4H3BJZ2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Cdhr4H3BJZ2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdhr4H3BJZ2 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.73■□□□□ 0.59
Cdhr4H3BJZ2 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.73■□□□□ 0.59
Cdhr4H3BJZ2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Cdhr4H3BJZ2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdhr4H3BJZ2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdhr4H3BJZ2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdhr4H3BJZ2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdhr4H3BJZ2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdhr4H3BJZ2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdhr4H3BJZ2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdhr4H3BJZ2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cdhr4H3BJZ2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdhr4H3BJZ2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cdhr4H3BJZ2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.72■□□□□ 0.59
Cdhr4H3BJZ2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdhr4H3BJZ2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdhr4H3BJZ2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdhr4H3BJZ2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdhr4H3BJZ2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdhr4H3BJZ2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.71■□□□□ 0.59
Cdhr4H3BJZ2 Gm7417-201ENSMUST00000192950 473 ntBASIC18.71■□□□□ 0.59
Cdhr4H3BJZ2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdhr4H3BJZ2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdhr4H3BJZ2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.7■□□□□ 0.58
Cdhr4H3BJZ2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdhr4H3BJZ2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.69■□□□□ 0.58
Cdhr4H3BJZ2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.69■□□□□ 0.58
Cdhr4H3BJZ2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdhr4H3BJZ2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdhr4H3BJZ2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdhr4H3BJZ2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Cdhr4H3BJZ2 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdhr4H3BJZ2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 736.1 ms