Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Gm11127A7VMS2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm11127A7VMS2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm11127A7VMS2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Gm11127A7VMS2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm11127A7VMS2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm11127A7VMS2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm11127A7VMS2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm11127A7VMS2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm11127A7VMS2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm11127A7VMS2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm11127A7VMS2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Gm11127A7VMS2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Gm11127A7VMS2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm11127A7VMS2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gm11127A7VMS2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gm11127A7VMS2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm11127A7VMS2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm11127A7VMS2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm11127A7VMS2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm11127A7VMS2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gm11127A7VMS2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm11127A7VMS2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gm11127A7VMS2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.72■□□□□ 0.59
Gm11127A7VMS2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gm11127A7VMS2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm11127A7VMS2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Gm11127A7VMS2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm11127A7VMS2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm11127A7VMS2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm11127A7VMS2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm11127A7VMS2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.71■□□□□ 0.59
Gm11127A7VMS2 Gm6311-201ENSMUST00000073790 878 ntBASIC18.71■□□□□ 0.59
Gm11127A7VMS2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm11127A7VMS2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm11127A7VMS2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm11127A7VMS2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm11127A7VMS2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm11127A7VMS2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm11127A7VMS2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm11127A7VMS2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm11127A7VMS2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm11127A7VMS2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.7■□□□□ 0.58
Gm11127A7VMS2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Gm11127A7VMS2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm11127A7VMS2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm11127A7VMS2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm11127A7VMS2 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.69■□□□□ 0.58
Gm11127A7VMS2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gm11127A7VMS2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Gm11127A7VMS2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm11127A7VMS2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm11127A7VMS2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Gm11127A7VMS2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.68■□□□□ 0.58
Gm11127A7VMS2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm11127A7VMS2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Gm11127A7VMS2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm11127A7VMS2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm11127A7VMS2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gm11127A7VMS2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gm11127A7VMS2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm11127A7VMS2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm11127A7VMS2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Gm11127A7VMS2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Gm11127A7VMS2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
Gm11127A7VMS2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Gm11127A7VMS2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm11127A7VMS2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Gm11127A7VMS2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm11127A7VMS2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm11127A7VMS2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm11127A7VMS2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm11127A7VMS2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.66■□□□□ 0.58
Gm11127A7VMS2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Gm11127A7VMS2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gm11127A7VMS2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Gm11127A7VMS2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm11127A7VMS2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm11127A7VMS2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm11127A7VMS2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm11127A7VMS2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm11127A7VMS2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gm11127A7VMS2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm11127A7VMS2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.65■□□□□ 0.58
Gm11127A7VMS2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm11127A7VMS2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Gm11127A7VMS2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm11127A7VMS2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm11127A7VMS2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Gm11127A7VMS2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Gm11127A7VMS2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Gm11127A7VMS2 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.64■□□□□ 0.57
Gm11127A7VMS2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Gm11127A7VMS2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.64■□□□□ 0.57
Gm11127A7VMS2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm11127A7VMS2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm11127A7VMS2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.64■□□□□ 0.57
Gm11127A7VMS2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm11127A7VMS2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm11127A7VMS2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms