Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd6A3KFM7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Chd6A3KFM7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Chd6A3KFM7 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd6A3KFM7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd6A3KFM7 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chd6A3KFM7 Nespas-201ENSMUST00000143738 1083 ntBASIC17.87■□□□□ 0.45
Chd6A3KFM7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.87■□□□□ 0.45
Chd6A3KFM7 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chd6A3KFM7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chd6A3KFM7 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chd6A3KFM7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Chd6A3KFM7 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chd6A3KFM7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chd6A3KFM7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chd6A3KFM7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chd6A3KFM7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.86■□□□□ 0.45
Chd6A3KFM7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd6A3KFM7 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd6A3KFM7 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Chd6A3KFM7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd6A3KFM7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd6A3KFM7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.85■□□□□ 0.45
Chd6A3KFM7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Chd6A3KFM7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.85■□□□□ 0.45
Chd6A3KFM7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd6A3KFM7 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.85■□□□□ 0.45
Chd6A3KFM7 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.85■□□□□ 0.45
Chd6A3KFM7 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.85■□□□□ 0.45
Chd6A3KFM7 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.85■□□□□ 0.45
Chd6A3KFM7 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.85■□□□□ 0.45
Chd6A3KFM7 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chd6A3KFM7 Gm43137-201ENSMUST00000198052 594 ntBASIC17.85■□□□□ 0.45
Chd6A3KFM7 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chd6A3KFM7 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chd6A3KFM7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.84■□□□□ 0.45
Chd6A3KFM7 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd6A3KFM7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.84■□□□□ 0.45
Chd6A3KFM7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd6A3KFM7 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Chd6A3KFM7 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Chd6A3KFM7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Chd6A3KFM7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chd6A3KFM7 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd6A3KFM7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd6A3KFM7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd6A3KFM7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Chd6A3KFM7 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Chd6A3KFM7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.82■□□□□ 0.44
Chd6A3KFM7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd6A3KFM7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.82■□□□□ 0.44
Chd6A3KFM7 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd6A3KFM7 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Chd6A3KFM7 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chd6A3KFM7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd6A3KFM7 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd6A3KFM7 Gm43173-201ENSMUST00000202246 593 ntBASIC17.81■□□□□ 0.44
Chd6A3KFM7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd6A3KFM7 Gm10602-201ENSMUST00000098239 609 ntBASIC17.81■□□□□ 0.44
Chd6A3KFM7 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd6A3KFM7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.8■□□□□ 0.44
Chd6A3KFM7 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd6A3KFM7 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd6A3KFM7 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd6A3KFM7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd6A3KFM7 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chd6A3KFM7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chd6A3KFM7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.8■□□□□ 0.44
Chd6A3KFM7 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd6A3KFM7 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd6A3KFM7 Gm8493-201ENSMUST00000196881 489 ntBASIC17.79■□□□□ 0.44
Chd6A3KFM7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.79■□□□□ 0.44
Chd6A3KFM7 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.79■□□□□ 0.44
Chd6A3KFM7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.79■□□□□ 0.44
Chd6A3KFM7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd6A3KFM7 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd6A3KFM7 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd6A3KFM7 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Chd6A3KFM7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd6A3KFM7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd6A3KFM7 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chd6A3KFM7 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chd6A3KFM7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd6A3KFM7 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chd6A3KFM7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd6A3KFM7 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chd6A3KFM7 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Chd6A3KFM7 Gm22240-201ENSMUST00000175225 82 ntBASIC17.77■□□□□ 0.43
Chd6A3KFM7 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.77■□□□□ 0.43
Chd6A3KFM7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Chd6A3KFM7 Gm18671-201ENSMUST00000214826 683 ntBASIC17.77■□□□□ 0.43
Chd6A3KFM7 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chd6A3KFM7 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd6A3KFM7 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Chd6A3KFM7 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.76■□□□□ 0.43
Chd6A3KFM7 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.76■□□□□ 0.43
Chd6A3KFM7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Chd6A3KFM7 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd6A3KFM7 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd6A3KFM7 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms