Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav13n-1A0A0G2JEU8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Gm20634-201ENSMUST00000090779 2956 ntBASIC15.33■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13n-1A0A0G2JEU8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13n-1A0A0G2JEU8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC15.33■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13n-1A0A0G2JEU8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.32■□□□□ 0.04
Trav13n-1A0A0G2JEU8 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.32■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC15.31■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trav13n-1A0A0G2JEU8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.31■□□□□ 0.04
Trav13n-1A0A0G2JEU8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC15.31■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13n-1A0A0G2JEU8 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.29■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trav13n-1A0A0G2JEU8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC15.28■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trav13n-1A0A0G2JEU8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Gm42501-201ENSMUST00000200220 1026 ntBASIC15.26■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Gm18755-201ENSMUST00000218030 1099 ntBASIC15.26■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Rps24-207ENSMUST00000224568 714 ntBASIC15.26■□□□□ 0.03
Trav13n-1A0A0G2JEU8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Gm10232-201ENSMUST00000089221 720 ntBASIC15.26■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms