Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.62■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trbv13-3A0A0B4J1H2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.61■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC16.61■□□□□ 0.25
Trbv13-3A0A0B4J1H2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.61■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trbv13-3A0A0B4J1H2 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.61■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Gm45855-201ENSMUST00000212546 880 ntBASIC16.61■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv13-3A0A0B4J1H2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv13-3A0A0B4J1H2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC16.59■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Tdp2-203ENSMUST00000223804 1136 ntBASIC16.59■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trbv13-3A0A0B4J1H2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.58■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv13-3A0A0B4J1H2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trbv13-3A0A0B4J1H2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.56■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.56■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.55■□□□□ 0.24
Trbv13-3A0A0B4J1H2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.55■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC16.55■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv13-3A0A0B4J1H2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.54■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.54■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv13-3A0A0B4J1H2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms