Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.99■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.99■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv12-1A0A0B4J1H0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.98■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv12-1A0A0B4J1H0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.96■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.96■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.96■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.95■□□□□ 0.62
Trbv12-1A0A0B4J1H0 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.95■□□□□ 0.62
Trbv12-1A0A0B4J1H0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.95■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trbv12-1A0A0B4J1H0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.94■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.94■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.93■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.92■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.92■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.92■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trbv12-1A0A0B4J1H0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.9■□□□□ 0.62
Trbv12-1A0A0B4J1H0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv12-1A0A0B4J1H0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.89■□□□□ 0.61
Trbv12-1A0A0B4J1H0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trbv12-1A0A0B4J1H0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Trbv12-1A0A0B4J1H0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trbv12-1A0A0B4J1H0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv12-1A0A0B4J1H0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv12-1A0A0B4J1H0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv12-1A0A0B4J1H0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Trbv12-1A0A0B4J1H0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv12-1A0A0B4J1H0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Trbv12-1A0A0B4J1H0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.87■□□□□ 0.61
Trbv12-1A0A0B4J1H0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Trbv12-1A0A0B4J1H0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv12-1A0A0B4J1H0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv12-1A0A0B4J1H0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv12-1A0A0B4J1H0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv12-1A0A0B4J1H0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv12-1A0A0B4J1H0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv12-1A0A0B4J1H0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.87■□□□□ 0.61
Trbv12-1A0A0B4J1H0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms