Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.82■□□□□ 0.44
Ighv3-4A0A0A6YXF1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
Ighv3-4A0A0A6YXF1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.82■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.82■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Golgb1-201ENSMUST00000023534 498 ntBASIC17.82■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Gm27454-201ENSMUST00000185090 204 ntBASIC17.81■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Serp2-204ENSMUST00000228055 705 ntBASIC17.81■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ighv3-4A0A0A6YXF1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.8■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.8■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv3-4A0A0A6YXF1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.79■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.78■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv3-4A0A0A6YXF1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.77■□□□□ 0.44
Ighv3-4A0A0A6YXF1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.77■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Gm45417-201ENSMUST00000209533 758 ntBASIC17.77■□□□□ 0.44
Ighv3-4A0A0A6YXF1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv3-4A0A0A6YXF1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv3-4A0A0A6YXF1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.76■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.76■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.75■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.74■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv3-4A0A0A6YXF1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv3-4A0A0A6YXF1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.74■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv3-4A0A0A6YXF1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.72■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.72■□□□□ 0.43
Ighv3-4A0A0A6YXF1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.72■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
Ighv3-4A0A0A6YXF1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.72■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv3-4A0A0A6YXF1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.72■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv3-4A0A0A6YXF1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv3-4A0A0A6YXF1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv3-4A0A0A6YXF1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv3-4A0A0A6YXF1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms