Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Gm13238-201ENSMUST00000117655 780 ntBASIC16.2■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Ighv1-52A0A0A6YXC3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.2■□□□□ 0.18
Ighv1-52A0A0A6YXC3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.19■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-52A0A0A6YXC3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.19■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.18■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.17■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.17■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.17■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.17■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.16■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.16■□□□□ 0.18
Ighv1-52A0A0A6YXC3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.16■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.16■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ighv1-52A0A0A6YXC3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-52A0A0A6YXC3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-52A0A0A6YXC3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-52A0A0A6YXC3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-52A0A0A6YXC3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ighv1-52A0A0A6YXC3 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-52A0A0A6YXC3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ighv1-52A0A0A6YXC3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-52A0A0A6YXC3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-52A0A0A6YXC3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Ighv1-52A0A0A6YXC3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.14■□□□□ 0.17
Ighv1-52A0A0A6YXC3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-52A0A0A6YXC3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ighv1-52A0A0A6YXC3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-52A0A0A6YXC3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-52A0A0A6YXC3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-52A0A0A6YXC3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-52A0A0A6YXC3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.13■□□□□ 0.17
Ighv1-52A0A0A6YXC3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-52A0A0A6YXC3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ighv1-52A0A0A6YXC3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-52A0A0A6YXC3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ighv1-52A0A0A6YXC3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-52A0A0A6YXC3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Ighv1-52A0A0A6YXC3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-52A0A0A6YXC3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-52A0A0A6YXC3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-52A0A0A6YXC3 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.12■□□□□ 0.17
Ighv1-52A0A0A6YXC3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms