Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trdv1A0A075B657 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trdv1A0A075B657 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Trdv1A0A075B657 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Trdv1A0A075B657 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trdv1A0A075B657 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Trdv1A0A075B657 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16.22■□□□□ 0.19
Trdv1A0A075B657 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC16.22■□□□□ 0.19
Trdv1A0A075B657 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trdv1A0A075B657 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trdv1A0A075B657 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trdv1A0A075B657 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trdv1A0A075B657 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trdv1A0A075B657 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trdv1A0A075B657 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trdv1A0A075B657 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trdv1A0A075B657 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trdv1A0A075B657 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trdv1A0A075B657 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.18
Trdv1A0A075B657 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.2■□□□□ 0.18
Trdv1A0A075B657 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trdv1A0A075B657 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trdv1A0A075B657 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trdv1A0A075B657 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trdv1A0A075B657 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trdv1A0A075B657 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trdv1A0A075B657 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trdv1A0A075B657 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Trdv1A0A075B657 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trdv1A0A075B657 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trdv1A0A075B657 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trdv1A0A075B657 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trdv1A0A075B657 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trdv1A0A075B657 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trdv1A0A075B657 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC16.18■□□□□ 0.18
Trdv1A0A075B657 Gm44428-201ENSMUST00000204474 874 ntBASIC16.18■□□□□ 0.18
Trdv1A0A075B657 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trdv1A0A075B657 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trdv1A0A075B657 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trdv1A0A075B657 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trdv1A0A075B657 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trdv1A0A075B657 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trdv1A0A075B657 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.18■□□□□ 0.18
Trdv1A0A075B657 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trdv1A0A075B657 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trdv1A0A075B657 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trdv1A0A075B657 AC167019.3-201ENSMUST00000228225 1266 ntBASIC16.17■□□□□ 0.18
Trdv1A0A075B657 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trdv1A0A075B657 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.17■□□□□ 0.18
Trdv1A0A075B657 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trdv1A0A075B657 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trdv1A0A075B657 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trdv1A0A075B657 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trdv1A0A075B657 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trdv1A0A075B657 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trdv1A0A075B657 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trdv1A0A075B657 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trdv1A0A075B657 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trdv1A0A075B657 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trdv1A0A075B657 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trdv1A0A075B657 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.16■□□□□ 0.18
Trdv1A0A075B657 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.15■□□□□ 0.18
Trdv1A0A075B657 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trdv1A0A075B657 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trdv1A0A075B657 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trdv1A0A075B657 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trdv1A0A075B657 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trdv1A0A075B657 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trdv1A0A075B657 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Trdv1A0A075B657 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trdv1A0A075B657 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trdv1A0A075B657 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trdv1A0A075B657 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trdv1A0A075B657 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC16.14■□□□□ 0.17
Trdv1A0A075B657 AC117769.4-201ENSMUST00000225679 685 ntBASIC16.14■□□□□ 0.17
Trdv1A0A075B657 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trdv1A0A075B657 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trdv1A0A075B657 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trdv1A0A075B657 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trdv1A0A075B657 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trdv1A0A075B657 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trdv1A0A075B657 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trdv1A0A075B657 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trdv1A0A075B657 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.13■□□□□ 0.17
Trdv1A0A075B657 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trdv1A0A075B657 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
Trdv1A0A075B657 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trdv1A0A075B657 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trdv1A0A075B657 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trdv1A0A075B657 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trdv1A0A075B657 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trdv1A0A075B657 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trdv1A0A075B657 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trdv1A0A075B657 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Trdv1A0A075B657 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC16.11■□□□□ 0.17
Trdv1A0A075B657 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trdv1A0A075B657 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trdv1A0A075B657 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trdv1A0A075B657 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trdv1A0A075B657 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms