Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav5-4A0A075B652 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav5-4A0A075B652 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav5-4A0A075B652 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trav5-4A0A075B652 Gm27502-201ENSMUST00000183495 199 ntBASIC17.69■□□□□ 0.42
Trav5-4A0A075B652 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.69■□□□□ 0.42
Trav5-4A0A075B652 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trav5-4A0A075B652 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav5-4A0A075B652 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav5-4A0A075B652 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trav5-4A0A075B652 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav5-4A0A075B652 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav5-4A0A075B652 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav5-4A0A075B652 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav5-4A0A075B652 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav5-4A0A075B652 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav5-4A0A075B652 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav5-4A0A075B652 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.68■□□□□ 0.42
Trav5-4A0A075B652 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav5-4A0A075B652 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav5-4A0A075B652 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav5-4A0A075B652 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav5-4A0A075B652 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav5-4A0A075B652 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav5-4A0A075B652 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav5-4A0A075B652 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav5-4A0A075B652 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav5-4A0A075B652 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav5-4A0A075B652 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav5-4A0A075B652 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav5-4A0A075B652 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trav5-4A0A075B652 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trav5-4A0A075B652 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trav5-4A0A075B652 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav5-4A0A075B652 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.66■□□□□ 0.42
Trav5-4A0A075B652 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.66■□□□□ 0.42
Trav5-4A0A075B652 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav5-4A0A075B652 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav5-4A0A075B652 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav5-4A0A075B652 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav5-4A0A075B652 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav5-4A0A075B652 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav5-4A0A075B652 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trav5-4A0A075B652 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav5-4A0A075B652 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav5-4A0A075B652 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav5-4A0A075B652 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trav5-4A0A075B652 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.66■□□□□ 0.42
Trav5-4A0A075B652 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav5-4A0A075B652 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav5-4A0A075B652 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav5-4A0A075B652 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav5-4A0A075B652 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trav5-4A0A075B652 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trav5-4A0A075B652 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.65■□□□□ 0.42
Trav5-4A0A075B652 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav5-4A0A075B652 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav5-4A0A075B652 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav5-4A0A075B652 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav5-4A0A075B652 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav5-4A0A075B652 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trav5-4A0A075B652 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.64■□□□□ 0.41
Trav5-4A0A075B652 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav5-4A0A075B652 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav5-4A0A075B652 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav5-4A0A075B652 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Trav5-4A0A075B652 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Trav5-4A0A075B652 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav5-4A0A075B652 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav5-4A0A075B652 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.63■□□□□ 0.41
Trav5-4A0A075B652 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav5-4A0A075B652 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.63■□□□□ 0.41
Trav5-4A0A075B652 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav5-4A0A075B652 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav5-4A0A075B652 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav5-4A0A075B652 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trav5-4A0A075B652 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav5-4A0A075B652 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav5-4A0A075B652 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav5-4A0A075B652 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Trav5-4A0A075B652 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav5-4A0A075B652 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav5-4A0A075B652 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.62■□□□□ 0.41
Trav5-4A0A075B652 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav5-4A0A075B652 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
Trav5-4A0A075B652 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav5-4A0A075B652 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trav5-4A0A075B652 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav5-4A0A075B652 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav5-4A0A075B652 Gm14523-201ENSMUST00000117260 558 ntBASIC17.61■□□□□ 0.41
Trav5-4A0A075B652 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trav5-4A0A075B652 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav5-4A0A075B652 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav5-4A0A075B652 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav5-4A0A075B652 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav5-4A0A075B652 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trav5-4A0A075B652 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav5-4A0A075B652 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.6■□□□□ 0.41
Trav5-4A0A075B652 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav5-4A0A075B652 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms